RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 C17orf58Q2M2W7 97 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 SLC24A4Q8NFF2 622 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 OCC1Q8TAD7 63 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 TRGV10A0A0A0MS01 117 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 NPY1RP25929 384 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 GATA4P43694 442 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 PRR20EP86478 221 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 PRR20CP86479 221 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 PRR20DP86480 221 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 PRR20BP86481 221 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 PRR20AP86496 221 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 NEUROG1Q92886 237 aa13.74□□□□□ -0.21
LIMS2-208ENST00000410011 SLC25A10Q9UBX3 287 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-208ENST00000410011 GPR179Q6PRD1 2367 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 KBTBD11-OT1A0A1B0GTJ5 212 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 SCO2A0A1W2PP80 73 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MBD3L4A6NDZ8 208 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MBD3L3A6NE82 208 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MBD3L5A6NJ08 208 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 SLC31A2O15432 143 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 GLRXP35754 106 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 TAS2R60P59551 318 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 PRSS8Q16651 343 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 TMEM30BQ3MIR4 351 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 CT45A1Q5HYN5 189 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 OR4A47Q6IF82 309 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 STPG3Q8N7X2 389 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 ZNRF1Q8ND25 227 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 CT45A3Q8NHU0 189 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MBD3L2Q8NHZ7 208 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 OR2V2Q96R30 315 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 YTHDF2Q9Y5A9 579 aaKnown RBP13.73□□□□□ -0.21
LIMS2-208ENST00000410011 SSX2Q16385 188 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 IL36BQ9NZH7 164 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 ZNF257Q9Y2Q1 563 aa13.73□□□□□ -0.21
LIMS2-208ENST00000410011 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-208ENST00000410011 RPL31P62899 125 aaKnown RBP13.72□□□□□ -0.21
LIMS2-208ENST00000410011 TIMM23BQ5SRD1 257 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 LRP11Q86VZ4 500 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 SDSLQ96GA7 329 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 PLPPR2Q96GM1 343 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 FAM234AQ9H0X4 552 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 SEPSECSQ9HD40 501 aaKnown RBP13.72□□□□□ -0.21
LIMS2-208ENST00000410011 AURKAIP1Q9NWT8 199 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-208ENST00000410011 TP53TG5Q9Y2B4 290 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 IGLV3-9A0A075B6K5 115 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 ESDP10768 282 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 RAB4BP61018 213 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 ENY2Q9NPA8 101 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 PRNDQ9UKY0 176 aa13.72□□□□□ -0.21
LIMS2-208ENST00000410011 SAA2-SAA4A0A096LPE2 208 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 SAA2P0DJI9 122 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-208ENST00000410011 BMP5P22003 454 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 PNKDQ8N490 385 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 SSMEM1Q8WWF3 244 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 IDI2-AS1Q9NZ38 188 aa13.71□□□□□ -0.21
LIMS2-208ENST00000410011 CELSR3Q9NYQ7 3312 aa13.71□□□□□ -0.22
LIMS2-208ENST00000410011 IGHV3OR15-7A0A075B7D8 119 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 CA2P00918 260 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 KLF3P57682 345 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-208ENST00000410011 TET2Q6N021 2002 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-208ENST00000410011 MOGAT3Q86VF5 341 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 C19orf24Q9BVV8 132 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 FKBP11Q9NYL4 201 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 A0A1B0GV90 55 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 A8MXE2 369 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 LINC00869P0C866 280 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
LIMS2-208ENST00000410011 SEM1Q6ZVN7 128 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 SLC45A2Q9UMX9 530 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 PCNX2A6NKB5 2137 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 WDFY4Q6ZS81 3184 aa13.7□□□□□ -0.22
LIMS2-208ENST00000410011 OR10J4P0C629 311 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 TRBV9A0A0B4J1U6 114 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 K7EN84 100 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 TM4SF5O14894 197 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 ADMP35318 185 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 ZNF90Q03938 601 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-208ENST00000410011 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
LIMS2-208ENST00000410011 OR10J1P30954 320 aa13.68□□□□□ -0.22
LIMS2-208ENST00000410011 PRCDQ00LT1 54 aa13.68□□□□□ -0.22
LIMS2-208ENST00000410011 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
LIMS2-208ENST00000410011 OR51B2Q9Y5P1 312 aa13.68□□□□□ -0.22
LIMS2-208ENST00000410011 LGALS4P56470 323 aa13.68□□□□□ -0.22
LIMS2-208ENST00000410011 RTL8BQ17RB0 113 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms