RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PYGO2Q9BRQ0 406 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF471Q9BX82 626 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-202ENST00000409915 ATG5Q9H1Y0 275 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 MAP6D1Q9H9H5 199 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 CACNA1DQ01668 2161 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 PDZD2O15018 2839 aa3.76□□□□□ -1.81
SF3B1-202ENST00000409915 SPG11Q96JI7 2443 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OTOGQ6ZRI0 2925 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 VPS13CQ709C8 3753 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 ALPK2Q86TB3 2170 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TRBV9A0A0B4J1U6 114 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 IGKV1D-43A0A0B4J1Z2 117 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 A0A0B4J2A0 478 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TRBV5-5A0A0J9YX44 114 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 hDV102S1A0JD36 115 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM213A2RRL7 107 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 RNF212BA8MTL3 300 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 H3BN98 237 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TRAPPC2LH3BP13 241 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 M0R1B8 84 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 SLC2A10O95528 541 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 HLA-HP01893 362 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OR4A8P0C604 315 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OR10J4P0C629 311 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 LIMS3P0CW19 117 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 LIMS4P0CW20 117 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PGA4P0DJD7 388 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PGA3P0DJD8 388 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 EGR2P11161 476 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PGAM2P15259 253 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PI3P19957 117 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CRYGSP22914 178 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 LOXP28300 417 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 RPL29P47914 159 aaKnown RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CSNK1A1P48729 337 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CX3CR1P49238 355 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF83P51522 516 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CRYBA4P53673 196 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CAV3P56539 151 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 FXYD6P3P58550 94 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 UBE2MP61081 183 aaKnown RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 UBE2KP61086 200 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 BSPH1Q075Z2 132 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 FOXE3Q13461 319 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 FHL1Q13642 323 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 P2RY6Q15077 328 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 GABRA6Q16445 453 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 UTF1Q5T230 341 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OTPQ5XKR4 325 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 SFXN4Q6P4A7 337 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 Q6ZSR3 168 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TMEM144Q7Z5S9 345 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CDC20BQ86Y33 519 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TGIF2LYQ8IUE0 185 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PRR26Q8N8Z3 221 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OR4F17Q8NGA8 305 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OR4F5Q8NH21 305 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF519Q8TB69 540 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 LGALS14Q8TCE9 139 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 Q8WTZ3 238 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 PHLDA1Q8WV24 401 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 FRZBQ92765 325 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 SDSLQ96GA7 329 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TSPAN32Q96QS1 320 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 OR4F4Q96R69 305 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TNFRSF13CQ96RJ3 184 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 MICU1Q9BPX6 476 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF649Q9BS31 505 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 TSSK6Q9BXA6 273 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 SHPKQ9UHJ6 478 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 AMDHD2Q9Y303 409 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 MRPS16Q9Y3D3 137 aaKnown RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 AK6Q9Y3D8 172 aaKnown RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 WIPI2Q9Y4P8 454 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 RBM7Q9Y580 266 aaKnown RBP3.75□□□□□ -1.81
SF3B1-202ENST00000409915 ABCA4P78363 2273 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CCDC168Q8NDH2 2452 aa3.75□□□□□ -1.81
SF3B1-202ENST00000409915 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 TRAV8-7A0A075B6U6 113 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 LOC102725191A0A1B0GVB3 256 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 DPRXA6NFQ7 191 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 OR5B21A6NL26 309 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 TAAR5O14804 337 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 SOX14O95416 240 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 DUS4LO95620 317 aaKnown RBP3.74□□□□□ -1.81
SF3B1-202ENST00000409915 PPP1R3DO95685 299 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 IGHG1P01857 330 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 IGHMP01871 453 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 ROS1P08922 2347 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 CXCL1P09341 107 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 PATE4P0C8F1 98 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 SMIM17P0DL12 118 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 ZNF19P17023 458 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 SNCAP37840 140 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 PTH2RP49190 550 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 PAX2Q02962 417 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 DAZAP2Q15038 168 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-202ENST00000409915 CLEC12AQ5QGZ9 265 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 PIK3CD-AS1Q5SR53 167 aa3.74□□□□□ -1.81
SF3B1-202ENST00000409915 TIMM23BQ5SRD1 257 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms