RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 KLF2Q9Y5W3 355 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-203ENST00000409101 F5P12259 2224 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 DPRXA6NFQ7 191 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 YPEL1O60688 119 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TBX6O95947 436 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TFF1P04155 84 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 PAX1P15863 534 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 PDZD11Q5EBL8 140 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 IGF2-ASQ6U949 168 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TEX45Q8NA69 505 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 PLPPR1Q8TBJ4 325 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 YPEL2Q96QA6 119 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 C19orf24Q9BVV8 132 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TM2D1Q9BX74 207 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 IFI27L2Q9H2X8 130 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 SRD5A3Q9H8P0 318 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 FRMPD3Q5JV73 1810 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TMEM14DPA8MWL7 114 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 MELTFP08582 738 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 OR9G9P0C7N8 305 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 IGHV1-8P0DP01 117 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 B3GALT5-AS1P59052 145 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 LEMD1Q68G75 181 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 TEX38Q6PEX7 206 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 LINC00305Q7Z4B0 112 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 CLDND2Q8NHS1 167 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 FGFBP3Q8TAT2 258 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 FAM110DQ8TAY7 271 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-203ENST00000409101 DMRTA2Q96SC8 542 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 REG4Q9BYZ8 158 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 THADAQ6YHU6 1953 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 C9JCJ5 164 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 GGCTO75223 188 aaKnown RBP4.19□□□□□ -1.74
SCN3A-203ENST00000409101 IGHV3-48P01763 117 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 SAA1P0DJI8 122 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-203ENST00000409101 C8orf88P0DMB2 117 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 ASIPP42127 132 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 UCP3P55916 312 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
SCN3A-203ENST00000409101 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 LCNL1Q6ZST4 164 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 CHAC2Q8WUX2 184 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 VGLL1Q99990 258 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 MIXL1Q9H2W2 232 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 SDF2L1Q9HCN8 221 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 V9GYH0 126 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 SCN3AQ9NY46 2000 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 H3BTX0 84 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 H7C1H1 209 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 TRGC1P0CF51 173 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 COX19Q49B96 90 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 GPHA2Q96T91 129 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 LINC00527Q9UJ94 153 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 TNFSF18Q9UNG2 199 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 ZNF257Q9Y2Q1 563 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 TET1Q8NFU7 2136 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 ALX3O95076 343 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 GAS1P54826 345 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 HIST1H3AP68431 136 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 ADIPOQQ15848 244 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 BSXQ3C1V8 233 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PHYHIPLQ96FC7 376 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 SMIM8Q96KF7 97 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PTPRZ1P23471 2315 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 A0A1B0GVG6 124 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 HMSDA8MTL9 139 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 CLDN34H7C241 214 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 EFNA2O43921 213 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 HLA-DRB1P01911 266 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 APCSP02743 223 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 AGAP20933 346 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 MFAP2P55001 183 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 FOXG1P55316 489 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PAX8Q06710 450 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 ZNF497Q6ZNH5 498 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PQLC2Q6ZP29 291 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 RNASEH2CQ8TDP1 164 aaKnown RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 LYZL4Q96KX0 146 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 NEU1Q99519 415 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 GPR132Q9UNW8 380 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 C17orf98A8MV24 154 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 CD5P06127 495 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 DLX1P56177 255 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 SERF2P84101 59 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 MORN2Q502X0 79 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 RUSC1-AS1Q66K80 236 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 MRPL54Q6P161 138 aaKnown RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 TICRRQ7Z2Z1 1910 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PTPRFP10586 1907 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 M0R2Z0 102 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 UPK2O00526 184 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PRSS2P07478 247 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 CEACAM8P31997 349 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PIP4P2Q8N4L2 257 aa4.18□□□□□ -1.74
SCN3A-203ENST00000409101 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-203ENST00000409101 SRSF12Q8WXF0 261 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms