RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF503-AS2A6NEH8 195 aa9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 CD82P27701 267 aa9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 HNRNPA3P51991 378 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 VSTM2AQ8TAG5 236 aa9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 CFAP54Q96N23 3096 aa9.76□□□□□ -0.85
UBE2D3-209ENST00000394804 ZNF891A8MT65 544 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 C1QTNF9P0C862 333 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 DEFA4P12838 97 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 BRS3P32247 399 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 DNLZQ5SXM8 178 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 LEAP2Q969E1 77 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 TMPRSS2O15393 492 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 SS18L1O75177 396 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 TFF1P04155 84 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 CBLN1P23435 193 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 VWA1Q6PCB0 445 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 ZNRF1Q8ND25 227 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 CBLN4Q9NTU7 201 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 SPRR3Q9UBC9 169 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 SPTBN2O15020 2390 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 EML6Q6ZMW3 1958 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 A0A1W2PN81 502 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 AHRRA9YTQ3 701 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 NKX2-8O15522 239 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 USF1P22415 310 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 GPX4P36969 197 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 GCSAMLQ5JQS6 135 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 OR1L8Q8NGR8 309 aa9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 MRPL37Q9BZE1 423 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 FGF23Q9GZV9 251 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-209ENST00000394804 PRRG2O14669 202 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 NDUFB3O43676 98 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 DUTP33316 252 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 TAS2R60P59551 318 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 MMD2Q8IY49 270 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 SCGB2A1O75556 95 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 SLC25A5P05141 298 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 OR9G9P0C7N8 305 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 LRRC10Q5BKY1 277 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 S100A7AQ86SG5 101 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 HAPLN4Q86UW8 402 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 RND1Q92730 232 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 CHEK1O14757 476 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 CRYBB3P26998 211 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 TNFSF10P50591 281 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 SLC35B1P78383 322 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 LOXL4Q96JB6 756 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 NABP2Q9BQ15 211 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 IL36BQ9NZH7 164 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 USF3Q68DE3 2245 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 CA2P00918 260 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 CRYABP02511 175 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 RAB4AP20338 218 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 FOXF2Q12947 444 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 TMEM108Q6UXF1 575 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 LRP11Q86VZ4 500 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 DEFB124Q8NES8 71 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 AP1S3Q96PC3 154 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 C11orf1Q9H5F2 150 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 ZNF835Q9Y2P0 537 aa9.74□□□□□ -0.85
UBE2D3-209ENST00000394804 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.851e-7■□□□□ 10
UBE2D3-209ENST00000394804 YPEL1O60688 119 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 RNF224P0DH78 156 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 LINC01551Q86U37 167 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 STARD4Q96DR4 205 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 YPEL2Q96QA6 119 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 CCL13Q99616 98 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 ROS1P08922 2347 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 IGHV2OR16-5A0A0B4J2B6 119 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 PGPEP1LA6NFU8 196 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 RPLP1P05386 114 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 GNB1P62873 340 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 ETFRF1Q6IPR1 90 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 FLYWCH2Q96CP2 140 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 SCRT1Q9BWW7 348 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 CPAMD8Q8IZJ3 1885 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 OTOGLQ3ZCN5 2332 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 SPTA1P02549 2419 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 TRBV9A0A0B4J1U6 114 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 SLC17A3O00476 420 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 PPIHO43447 177 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 CAMPP49913 170 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 MORN2Q502X0 79 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 TGIF2LXQ8IUE1 241 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 COQ2Q96H96 371 aa9.73□□□□□ -0.85
UBE2D3-209ENST00000394804 TRAV9-1A0A075B6T8 112 aa9.72□□□□□ -0.85
UBE2D3-209ENST00000394804 FAM90A9PA6NNJ1 464 aa9.72□□□□□ -0.85
UBE2D3-209ENST00000394804 K7EQM0 130 aa9.72□□□□□ -0.85
UBE2D3-209ENST00000394804 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
UBE2D3-209ENST00000394804 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms