RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 SGMS2Q8NHU3 365 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 RNASE11Q8TAA1 199 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 SEC22AQ96IW7 307 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 HINT2Q9BX68 163 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 GON7Q9BXV9 100 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 KLK15Q9H2R5 256 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 BET1LQ9NYM9 111 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 TBC1D24Q9ULP9 559 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 KCNIP3Q9Y2W7 256 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 TCRBV4S1A1TA0A5B7 111 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 OR9G9P0C7N8 305 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 PF4V1P10720 104 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM267Q0VDI3 215 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 TEX38Q6PEX7 206 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 H2BFWTQ7Z2G1 175 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 C7orf50Q9BRJ6 194 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 NUBP2Q9Y5Y2 271 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 TRAV6A0A075B6T7 132 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 DBX1A6NMT0 343 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 UPK2O00526 184 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 CREBL2O60519 120 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 IGKV1-5P01602 117 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 RPLP1P05386 114 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 HLA-GP17693 338 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 ANXA7P20073 488 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 UCP1P25874 307 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 PPIFP30405 207 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 RAB25P57735 213 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM128Q5BJH2 165 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
DEPDC4-202ENST00000378244 SNAPC5O75971 98 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 CDS2O95674 445 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 CD83Q01151 205 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 PPP1R1AQ13522 171 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 POU2AF1Q16633 256 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 AKIRIN2Q53H80 203 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 C19orf35Q6ZS72 473 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 RRNAD1Q96FB5 475 aaKnown RBP9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 NUDT15Q9NV35 164 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 A0A0G2JRQ6 117 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 FAM240BA0A1B0GVZ2 78 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 A0A1B0GW64 132 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 PRH1P02810 166 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 REG1AP05451 166 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 RPL27AP46776 148 aaKnown RBP9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 DEFA5Q01523 94 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 CFHR3Q02985 330 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 ASPHD1Q5U4P2 390 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM65Q6PI78 240 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 OR10W1Q8NGF6 305 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 OR5B12Q96R08 314 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 SPIN2AQ99865 258 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 SPIN2BQ9BPZ2 258 aa9.17□□□□□ -0.94
DEPDC4-202ENST00000378244 IGHG4P01861 327 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 TCRBP04435 133 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 SLC6A1P30531 599 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM187Q14656 261 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 SPINK9Q5DT21 86 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 MINDY2Q8NBR6 621 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 OR4A16Q8NH70 328 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 RBPMSQ93062 196 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 C20orf85Q9H1P6 137 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 FAM212BQ9NTI7 297 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 COA4Q9NYJ1 87 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 FOXA2Q9Y261 457 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 HLA-AP01891 365 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 ANXA3P12429 323 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 AREGP15514 252 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 CXorf66Q5JRM2 361 aaPredicted RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 LYZL2Q7Z4W2 148 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 SELENOHQ8IZQ5 122 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 GALNT14Q96FL9 552 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 TSC22D3Q99576 134 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 OR51B2Q9Y5P1 312 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 ANK2Q01484 3957 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 NOTCH3Q9UM47 2321 aa9.16□□□□□ -0.94
DEPDC4-202ENST00000378244 TEX50A0A1B0GTY4 177 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 CGB1A6NKQ9 187 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 NUDT19A8MXV4 375 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 NXPH3O95157 252 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 PSMB8P28062 276 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 DHODHQ02127 395 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 ASAH1Q13510 395 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 C19orf54Q5BKX5 351 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 Q6ZRM9 215 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 SLC25A42Q86VD7 318 aa9.15□□□□□ -0.94
DEPDC4-202ENST00000378244 A0A0B4J293 547 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms