RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 COQ2Q96H96 371 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 IL36BQ9NZH7 164 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 DEFB108AA8MXU0 73 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 AGFG2O95081 481 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 CD1BP29016 333 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 SLC35E4Q6ICL7 350 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 OR1L6Q8NGR2 347 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 SLC35E1Q96K37 410 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 ARL14EPLP0DKL9 152 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 SSTR5P35346 364 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 IER3P46695 156 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 PRAMEF6Q5VXH4 476 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 METRNQ9UJH8 293 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 WDR83OSQ9Y284 106 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 HLA-DRB5Q30154 266 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 OR4B1Q8NGF8 309 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 TXNDC17Q9BRA2 123 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 LRFN3Q9BTN0 628 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 FBXL7Q9UJT9 491 aa13.78□□□□□ -0.2
PCDHA1-201ENST00000378133 TRAV9-1A0A075B6T8 112 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 LINC00473A8K010 186 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 DIRC3C9JPN6 131 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 CCL25O15444 150 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 Q0VG73 95 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 LEMD1Q68G75 181 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 CHODLQ9H9P2 273 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 PPIAL4AQ9Y536 164 aa13.77□□□□□ -0.2
PCDHA1-201ENST00000378133 RAB29O14966 203 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 CLDN14O95500 239 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 ZNF318Q5VUA4 2279 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 SNURFLB1AK76 121 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 WISP2O76076 250 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 GPX1P07203 203 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 FRMD6-AS1P0C7T7 363 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 SUMO1P63165 101 aaKnown RBP13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 LTC4SQ16873 150 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 OR13A1Q8NGR1 328 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 RNF2Q99496 336 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 ZNF586Q9NXT0 402 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 RNF114Q9Y508 228 aa13.77□□□□□ -0.21
PCDHA1-201ENST00000378133 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 CNEP1R1Q8N9A8 125 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 PLPPR2Q96GM1 343 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 TRIB1Q96RU8 372 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 PSG11Q9UQ72 335 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 ASPMQ8IZT6 3477 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 CBY3A6NI87 242 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 CIDEAO60543 219 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 FABP6P51161 128 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 LGALS4P56470 323 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 SPATA45Q537H7 98 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 INO80CQ6PI98 192 aaPredicted RBP13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 WDR82Q6UXN9 313 aa13.76□□□□□ -0.21
PCDHA1-201ENST00000378133 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 K7EN84 100 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 CXorf1O96002 111 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 SLC45A2Q9UMX9 530 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 C20orf202A1L168 122 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 STAG3L2P0CL84 134 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 STAG3L3P0CL85 134 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 PTTG1IPP53801 180 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 C1orf174Q8IYL3 243 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 CXXC4Q9H2H0 198 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
PCDHA1-201ENST00000378133 TIMM8AO60220 97 aaPredicted RBP13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 RPL31P62899 125 aaKnown RBP13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 HES3Q5TGS1 186 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 Q6ZT83 130 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 STPG4Q8N801 248 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 Q8N976 141 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 TMEM178AQ8NBL3 297 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 NKX6-3A6NJ46 265 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 CTRLP40313 264 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 HTD2P86397 168 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 TXN2Q99757 166 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 UQCR10Q9UDW1 63 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 YTHDF2Q9Y5A9 579 aaKnown RBP13.74□□□□□ -0.21
PCDHA1-201ENST00000378133 RRHO14718 337 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 OPRK1P41145 380 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 STARD4Q96DR4 205 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 TAAR6Q96RI8 345 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 NRN1Q9NPD7 142 aa13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 YLPM1P49750 1951 aaKnown RBP13.73□□□□□ -0.21
PCDHA1-201ENST00000378133 HCFC1P51610 2035 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms