RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HRASP01112 189 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 DEFA4P12838 97 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 HLA-GP17693 338 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 GALP22466 123 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 GPR183P32249 361 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF585BQ52M93 769 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF66Q6ZN08 573 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
CXCL12-202ENST00000374426 Q6ZWC4 215 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF367Q7RTV3 350 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 LYG2Q86SG7 212 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF502Q8TBZ5 544 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 CXorf58Q96LI9 332 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 BET1LQ9NYM9 111 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 ANXA10Q9UJ72 324 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 IGLC7A0M8Q6 106 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 SPRY2O43597 315 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 BMI1P35226 326 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 OR2B8PP59922 312 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 DEFB135Q30KP9 77 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 TIMM50Q3ZCQ8 353 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 C22orf42Q6IC83 251 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 OR2C3Q8N628 320 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
CXCL12-202ENST00000374426 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
CXCL12-202ENST00000374426 TRAV3A0A0B4J244 114 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 TNFSF12O43508 249 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 APOC4P55056 127 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 ELLP55199 621 aaPredicted RBP10.23□□□□□ -0.77
CXCL12-202ENST00000374426 GNG2P59768 71 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 SPAG8Q99932 426 aaPredicted RBP10.23□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF436Q9C0F3 470 aaPredicted RBP10.23□□□□□ -0.77
CXCL12-202ENST00000374426 C5orf66Q9H5L9 145 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 HRASLSQ9HDD0 168 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 CCL28Q9NRJ3 127 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 UBQLN2Q9UHD9 624 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 VPS13DQ5THJ4 4388 aa10.23□□□□□ -0.77
CXCL12-202ENST00000374426 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 ANKRD65E5RJM6 399 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 TSPAN4O14817 238 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 PTHLHP12272 177 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 ATF4P18848 351 aaPredicted RBP10.22□□□□□ -0.77
CXCL12-202ENST00000374426 PTBP1P26599 531 aaKnown RBP eCLIP10.22□□□□□ -0.77
CXCL12-202ENST00000374426 MSMO1Q15800 293 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 ZNF773Q6PK81 442 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 PLET1Q6UQ28 207 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 SLC38A6Q8IZM9 456 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 SPAG16Q8N0X2 631 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 RPP25LQ8N5L8 163 aaKnown RBP10.22□□□□□ -0.77
CXCL12-202ENST00000374426 SECTM1Q8WVN6 248 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 TMEM190Q8WZ59 177 aa10.22□□□□□ -0.77
CXCL12-202ENST00000374426 KIR2DL5BA0A0G2JN68 375 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 KIR2DL5BA0A0G2JPC4 375 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 UBE2CO00762 179 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.77
CXCL12-202ENST00000374426 TGOLN2O43493 480 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 SCGNO76038 276 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 S1PR2O95136 353 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 FCGR2CP31995 323 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 KIR2DL5AQ8N109 375 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 OR13F1Q8NGS4 319 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 RNF183Q96D59 192 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 SRSF8Q9BRL6 282 aaKnown RBP10.21□□□□□ -0.77
CXCL12-202ENST00000374426 AIFM2Q9BRQ8 373 aa10.21□□□□□ -0.77
CXCL12-202ENST00000374426 PCLOQ9Y6V0 5065 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 SULT1C2O00338 296 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 UPK2O00526 184 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 RPA2P15927 270 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 TAS2R31P59538 309 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 BEST4Q8NFU0 473 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 OR10W1Q8NGF6 305 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 LGALS14Q8TCE9 139 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
CXCL12-202ENST00000374426 COMMD5Q9GZQ3 224 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 DAZ1Q9NQZ3 744 aaKnown RBP10.2□□□□□ -0.78
CXCL12-202ENST00000374426 THYN1Q9P016 225 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
CXCL12-202ENST00000374426 KLK5Q9Y337 293 aaPredicted RBP10.2□□□□□ -0.78
CXCL12-202ENST00000374426 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 DEDDO75618 318 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 HPRT1P00492 218 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 PPYP01298 95 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 FGF2P09038 288 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 NQO2P16083 231 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 FGF9P31371 208 aaPredicted RBP10.19□□□□□ -0.78
CXCL12-202ENST00000374426 ARPC4P59998 168 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 GDPD1Q8N9F7 314 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 ZBTB34Q8NCN2 500 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 TMEM140Q9NV12 185 aa10.19□□□□□ -0.78
CXCL12-202ENST00000374426 TXNL4BQ9NX01 149 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms