RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 TRAV8-6A0A0B4J262 113 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 A0A1B0GV72 72 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 NPPCP23582 126 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 ATP5G3P48201 142 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 ICAM4Q14773 271 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 FAM106AQ4KMX7 169 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 F8VVB4 439 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 F8VWA3 439 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 IGKV3-15P01624 115 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 APOHP02749 345 aaPredicted RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 IGFBP2P18065 325 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 FBLN5Q9UBX5 448 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 TMEM170AQ8WVE7 144 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
CHD4-201ENST00000357008 C1QTNF9BB2RNN3 333 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 NKX2-8O15522 239 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 ACP7Q6ZNF0 438 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
CHD4-201ENST00000357008 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 FGF16O43320 207 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 TSPOP30536 169 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 RRN3P1Q2M238 152 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 A0A1B0GW15 77 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 A0A1W2PQM1 296 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 ATP5LO75964 103 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 ANKRD31Q8N7Z5 1873 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 ZNF324BQ6AW86 544 aaPredicted RBP12.56□□□□□ -0.4
CHD4-201ENST00000357008 ZNRF1Q8ND25 227 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 GP6Q9HCN6 339 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 NRN1LQ496H8 165 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 LINC00469Q8N7U9 141 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
CHD4-201ENST00000357008 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 COL4A1P02462 1669 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 IZUMO1RA6ND01 250 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 FOXI3A8MTJ6 420 aaPredicted RBP12.56□□□□□ -0.4
CHD4-201ENST00000357008 RPP21Q9H633 154 aaKnown RBP12.56□□□□□ -0.4
CHD4-201ENST00000357008 MRPL16Q9NX20 251 aaKnown RBP12.56□□□□□ -0.4
CHD4-201ENST00000357008 DNASE2BQ8WZ79 361 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 C18orf12Q96KH6 178 aa12.56□□□□□ -0.4
CHD4-201ENST00000357008 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
CHD4-201ENST00000357008 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 CLEC2AQ6UVW9 174 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 TDRD15B5MCY1 1934 aaKnown RBP12.55□□□□□ -0.4
CHD4-201ENST00000357008 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 Q6AWC8 147 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 Q6ZT83 130 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 C18orf15Q96N68 181 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 EEF1AKMT3Q96AZ1 226 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 CHCHD2Q9Y6H1 151 aaPredicted RBP12.55□□□□□ -0.4
CHD4-201ENST00000357008 APC2O95996 2303 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 ACSF3Q4G176 576 aaPredicted RBP12.55□□□□□ -0.4
CHD4-201ENST00000357008 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 ZNF56Q15929 161 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 CACNG8Q8WXS5 425 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
CHD4-201ENST00000357008 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 IGKV3D-11A0A0A0MRZ8 115 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 PPP1R17O96001 155 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
CHD4-201ENST00000357008 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
CHD4-201ENST00000357008 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 UBE2CO00762 179 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 SERF1AO75920 110 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 UCNP55089 124 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 MPZP25189 248 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 RSPO4Q2I0M5 234 aaPredicted RBP12.54□□□□□ -0.4
CHD4-201ENST00000357008 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 TIMP4Q99727 224 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 TRAV24A0A0B4J272 114 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 OR52E5Q8NH55 327 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 ST6GALNAC6Q969X2 333 aa12.54□□□□□ -0.4
CHD4-201ENST00000357008 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 TM4SF5O14894 197 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 PNKDQ8N490 385 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 TEX45Q8NA69 505 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
CHD4-201ENST00000357008 TMEM170BQ5T4T1 132 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms