RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 TTC9CQ8N5M4 171 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 BEST4Q8NFU0 473 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 TCTEX1D2Q8WW35 142 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 RNF183Q96D59 192 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 SPATA2Q9UM82 520 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 PKD1P98161 4303 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 TRBV9A0A0B4J1U6 114 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
DDX55-202ENST00000354291 CBLN1P23435 193 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
DDX55-202ENST00000354291 NEDD8Q15843 81 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 OR2B11Q5JQS5 317 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 MFSD4AQ8N468 514 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 OR5H6Q8NGV6 325 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 OR2A7Q96R45 310 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 AKIP1Q9NQ31 210 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 HSPG2P98160 4391 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 HERC1Q15751 4861 aa11.76□□□□□ -0.53
DDX55-202ENST00000354291 PPP5D1E7EU14 171 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 OR2C1O95371 312 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 HRASP01112 189 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 PRH1P02810 166 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 MAS1LP35410 378 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 RHOGP84095 191 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
DDX55-202ENST00000354291 MSMO1Q15800 293 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 KCTD21Q4G0X4 260 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 CROCCP3Q8IVE0 287 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
DDX55-202ENST00000354291 PRSS29PA6NIE9 313 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 UBE2CO00762 179 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 KBTBD11O94819 623 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 CTRB1P17538 263 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 FCGR2CP31995 323 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 CBX5P45973 191 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 RBMS2Q15434 407 aaKnown RBP11.74□□□□□ -0.53
DDX55-202ENST00000354291 CTRB2Q6GPI1 263 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
DDX55-202ENST00000354291 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
DDX55-202ENST00000354291 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
DDX55-202ENST00000354291 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 BRWD1-AS2P59051 145 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 C10orf55Q5SWW7 151 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 OR13F1Q8NGS4 319 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 C11orf45Q8TAV5 145 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 MLXQ9UH92 298 aa11.73□□□□□ -0.53
DDX55-202ENST00000354291 IGLL5B9A064 214 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 PPYP01298 95 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 RPL35AP18077 110 aaKnown RBP11.72□□□□□ -0.53
DDX55-202ENST00000354291 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
DDX55-202ENST00000354291 UXS1Q8NBZ7 420 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 OR5AP2Q8NGF4 316 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 GIMAP1Q8WWP7 306 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 S100A16Q96FQ6 103 aaKnown RBP11.72□□□□□ -0.53
DDX55-202ENST00000354291 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 UBQLN2Q9UHD9 624 aa11.72□□□□□ -0.53
DDX55-202ENST00000354291 HMX3A6NHT5 357 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 LGALS9O00182 355 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 TNFSF12O43508 249 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
DDX55-202ENST00000354291 DHFRP00374 187 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.53
DDX55-202ENST00000354291 ZNF735P0CB33 412 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 PTHLHP12272 177 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 TCTAP57738 103 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
DDX55-202ENST00000354291 C15orf32Q32M92 178 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 RBPMS2Q6ZRY4 209 aaKnown RBP11.71□□□□□ -0.53
DDX55-202ENST00000354291 SSX9Q7RTT3 188 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 OR1L6Q8NGR2 347 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 OR4A5Q8NH83 315 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
DDX55-202ENST00000354291 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
DDX55-202ENST00000354291 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms