RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ST8SIA3O43173 380 aa21.51■■□□□ 1.03
SSBP4-202ENST00000348495 AMY1AP04745 511 aa21.51■■□□□ 1.03
SSBP4-202ENST00000348495 SSBP2P81877 361 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-202ENST00000348495 PLGLAQ15195 96 aa21.51■■□□□ 1.03
SSBP4-202ENST00000348495 TMEM86BQ8N661 226 aa21.51■■□□□ 1.03
SSBP4-202ENST00000348495 HSPB7Q9UBY9 170 aa21.51■■□□□ 1.03
SSBP4-202ENST00000348495 RBMXL2O75526 392 aaKnown RBP21.5■■□□□ 1.03
SSBP4-202ENST00000348495 MYOD1P15172 320 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 CD300CQ08708 224 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 PDLIM3Q53GG5 364 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-202ENST00000348495 OR52E5Q8NH55 327 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 PPP1R1CQ8WVI7 109 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 FKBP11Q9NYL4 201 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 ZNF257Q9Y2Q1 563 aa21.5■■□□□ 1.03
SSBP4-202ENST00000348495 FN1P02751 2386 aaKnown RBP21.5■■□□□ 1.03
SSBP4-202ENST00000348495 FAM90A26D6RGX4 464 aa21.49■■□□□ 1.03
SSBP4-202ENST00000348495 MBPP02686 304 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-202ENST00000348495 MAS1LP35410 378 aa21.49■■□□□ 1.03
SSBP4-202ENST00000348495 NKX2-1P43699 371 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-202ENST00000348495 RBMS3Q6XE24 437 aaKnown RBP21.49■■□□□ 1.03
SSBP4-202ENST00000348495 CLCC1Q96S66 551 aa21.49■■□□□ 1.03
SSBP4-202ENST00000348495 OR51B2Q9Y5P1 312 aa21.49■■□□□ 1.03
SSBP4-202ENST00000348495 TNFRSF9Q07011 255 aa21.49■■□□□ 1.03
SSBP4-202ENST00000348495 TET2Q6N021 2002 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-202ENST00000348495 PLXNB1O43157 2135 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 TEX50A0A1B0GTY4 177 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 G3V3Q6 166 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 M0QZK8 103 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 NXPH3O95157 252 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 CA2P00918 260 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 HLA-DRB1P01911 266 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 HSPE1P61604 102 aaKnown RBP21.48■■□□□ 1.03
SSBP4-202ENST00000348495 RAB32Q13637 225 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 TCTE3Q8IZS6 198 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 OR5B3Q8NH48 314 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 RASL11BQ9BPW5 248 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 CACFD1Q9UGQ2 172 aa21.48■■□□□ 1.03
SSBP4-202ENST00000348495 COMPP49747 757 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-202ENST00000348495 Q5BKY6 102 aa21.47■■□□□ 1.03
SSBP4-202ENST00000348495 OR2T35Q8NGX2 323 aa21.47■■□□□ 1.03
SSBP4-202ENST00000348495 COMMD5Q9GZQ3 224 aa21.47■■□□□ 1.03
SSBP4-202ENST00000348495 CRLF1O75462 422 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 SCGB1D2O95969 90 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 SPCS3P61009 180 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 C10orf55Q5SWW7 151 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 TNFRSF19Q9NS68 423 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 RCL1Q9Y2P8 373 aaKnown RBP21.46■■□□□ 1.03
SSBP4-202ENST00000348495 CGB1A6NKQ9 187 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 E7EUB6 86 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 K7EPK0 472 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 FAM157CP0CG43 387 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 PSMB6P28072 239 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 ZNF562Q6V9R5 426 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 ESM1Q9NQ30 184 aa21.46■■□□□ 1.03
SSBP4-202ENST00000348495 TRAV14DV4A0A0A6YYC5 116 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 A0A1B0GW64 132 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 PFDN1O60925 122 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 MPC2O95563 127 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 IFNA17P01571 189 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 POLR2GP62487 172 aaKnown RBP eCLIP21.45■■□□□ 1.02
SSBP4-202ENST00000348495 TNXAQ16473 311 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 LRRC37A5PQ49AS3 106 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 OR1L8Q8NGR8 309 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 MAGT1Q9H0U3 335 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 NDUFA4L2Q9NRX3 87 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 ZFP57Q9NU63 452 aa21.45■■□□□ 1.02
SSBP4-202ENST00000348495 IGHV7-81A0A0B4J1V7 117 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 DNAJC9-AS1A6NH13 148 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 CLDN34H7C241 214 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 ACTL6BO94805 426 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 OPN1MWP04001 364 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 OPN1MW2P0DN77 364 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 OPN1MW3P0DN78 364 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 CX3CL1P78423 397 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 PRCDQ00LT1 54 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 RBKSQ9H477 322 aa21.44■■□□□ 1.02
SSBP4-202ENST00000348495 H0YIZ8 118 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 SMLR1H3BR10 107 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 S100A10P60903 97 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 GNB1P62873 340 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 HSPB9Q9BQS6 159 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 RNF126Q9BV68 326 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 SYNGR2O43760 224 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 NDPQ00604 133 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 FGL1Q08830 312 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 SPINK9Q5DT21 86 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 ZNF418Q8TF45 676 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-202ENST00000348495 SRSF12Q8WXF0 261 aaKnown RBP21.43■■□□□ 1.02
SSBP4-202ENST00000348495 DUX5Q96PT3 197 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 C11orf1Q9H5F2 150 aa21.43■■□□□ 1.02
SSBP4-202ENST00000348495 LSM5Q9Y4Y9 91 aaKnown RBP21.43■■□□□ 1.02
SSBP4-202ENST00000348495 SH2D7A6NKC9 451 aaPredicted RBP21.42■■□□□ 1.02
SSBP4-202ENST00000348495 RPL27AP46776 148 aaKnown RBP21.42■■□□□ 1.02
SSBP4-202ENST00000348495 FXYD3Q14802 87 aa21.42■■□□□ 1.02
SSBP4-202ENST00000348495 MED6O75586 246 aa21.41■■□□□ 1.02
SSBP4-202ENST00000348495 DEDDO75618 318 aa21.41■■□□□ 1.02
SSBP4-202ENST00000348495 HILS1P60008 231 aa21.41■■□□□ 1.02
SSBP4-202ENST00000348495 BLCAPP62952 87 aa21.41■■□□□ 1.02
SSBP4-202ENST00000348495 SSSCA1O60232 199 aa21.41■■□□□ 1.02
SSBP4-202ENST00000348495 CNIH1O95406 144 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms