RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 ZIC3O60481 467 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 AMY1AP04745 511 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 CCL2P13500 99 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 GNG4P50150 75 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 PLP1P60201 277 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 FAM69BQ5VUD6 431 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 C12orf54Q6X4T0 127 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 BHLHA15Q7RTS1 189 aaPredicted RBP13.52□□□□□ -0.25
MBD1-204ENST00000347968 ULBP2Q9BZM5 246 aa13.52□□□□□ -0.25
MBD1-204ENST00000347968 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
MBD1-204ENST00000347968 THADAQ6YHU6 1953 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 DHHO43323 396 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 SYNGR1O43759 233 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 CD5LO43866 347 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 CGAP01215 116 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 PTGDSP41222 190 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 GDF5OSQ5U4N7 250 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 FGFBP3Q8TAT2 258 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 TMEM70Q9BUB7 260 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 LOC102723996A0A087X1L8 192 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 RAB9AP51151 201 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 WDR73Q6P4I2 378 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 STRADBQ9C0K7 418 aa13.51□□□□□ -0.25
MBD1-204ENST00000347968 PPIAL4EA0A075B759 164 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 PPIAL4FP0DN26 164 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 ZNF32P17041 273 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 MFAP2P55001 183 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 STXBP6Q8NFX7 210 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 OR10G3Q8NGC4 313 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 FGF23Q9GZV9 251 aaPredicted RBP13.5□□□□□ -0.25
MBD1-204ENST00000347968 MYF5P13349 255 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 PRO3102Q9H379 93 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 ZNF331Q9NQX6 463 aaPredicted RBP13.5□□□□□ -0.25
MBD1-204ENST00000347968 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 MT-ND6P03923 174 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 ZNF138P52744 262 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 PDLIM3Q53GG5 364 aaPredicted RBP13.5□□□□□ -0.25
MBD1-204ENST00000347968 SCCPDHQ8NBX0 429 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 METTL7AQ9H8H3 244 aa13.5□□□□□ -0.25
MBD1-204ENST00000347968 YPEL5P62699 121 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 SCGB2A2Q13296 93 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 DRAM1Q8N682 238 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 SLC25A40Q8TBP6 338 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
MBD1-204ENST00000347968 IGHV1OR15-9A0A0B4J2B8 117 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 TEX48A0A1B0GUV7 120 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 ZNF788Q6ZQV5 615 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 OR10W1Q8NGF6 305 aa13.49□□□□□ -0.25
MBD1-204ENST00000347968 IGHV3-9P01782 118 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 GPR183P32249 361 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
MBD1-204ENST00000347968 ZNF718Q3SXZ3 478 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 COMMD5Q9GZQ3 224 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 TMEM38BQ9NVV0 291 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 HELTA6NFD8 242 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 TNFSF11O14788 317 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 GCHFRP30047 84 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 CRYBA4P53673 196 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 ARF6P62330 175 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 UFSP1Q6NVU6 142 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 SLC23A3Q6PIS1 610 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 TRAV9-1A0A075B6T8 112 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 A0A1W2PPC4 97 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 NPIPA3F8WFD2 350 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 NEURL1O76050 574 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 CRYGSP22914 178 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 HTR1DP28221 377 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 C10orf35Q96D05 121 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 LINC00479Q96M42 142 aa13.48□□□□□ -0.25
MBD1-204ENST00000347968 BLACEA4D250 179 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 AGFG2O95081 481 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 ZNF441Q8N8Z8 693 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 ZNF355PQ9NSJ1 428 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 EML6Q6ZMW3 1958 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.47□□□□□ -0.25
MBD1-204ENST00000347968 hCG_38984A0A1B0GV85 526 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 LRRC30A6NM36 301 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 REG1AP05451 166 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 STAG3L2P0CL84 134 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 STAG3L3P0CL85 134 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
MBD1-204ENST00000347968 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
MBD1-204ENST00000347968 URB1-AS1Q96HZ7 61 aa13.47□□□□□ -0.25
MBD1-204ENST00000347968 LIN7CQ9NUP9 197 aaKnown RBP13.47□□□□□ -0.25
MBD1-204ENST00000347968 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
MBD1-204ENST00000347968 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
MBD1-204ENST00000347968 A0A1B0GV72 72 aa13.46□□□□□ -0.25
MBD1-204ENST00000347968 SYNGR3O43761 229 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms