RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 WDR87Q6ZQQ6 2873 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 IGHV1-45A0A0A0MS14 117 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 CBY3A6NI87 242 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 J3QR06 171 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 NGFP01138 241 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 CA6P23280 308 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 UBE2G1P62253 170 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 ZNF146Q15072 292 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 LDLRAD2Q5SZI1 272 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 YRDCQ86U90 279 aaKnown RBP12.99□□□□□ -0.33
LRP8-202ENST00000347547 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 GALMQ96C23 342 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 C1RLQ9NZP8 487 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 SLC25A10Q9UBX3 287 aaPredicted RBP12.99□□□□□ -0.33
LRP8-202ENST00000347547 IZUMO1RA6ND01 250 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 EBLN2Q6P2I7 272 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 WDR54Q9H977 334 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 ST20Q9HBF5 79 aa12.99□□□□□ -0.33
LRP8-202ENST00000347547 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 SPINK4O60575 86 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
LRP8-202ENST00000347547 TIGITQ495A1 244 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 IFI44Q8TCB0 444 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 C1orf159Q96HA4 380 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 HSD17B10Q99714 261 aaKnown RBP12.98□□□□□ -0.33
LRP8-202ENST00000347547 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
LRP8-202ENST00000347547 SEPSECSQ9HD40 501 aaKnown RBP12.98□□□□□ -0.33
LRP8-202ENST00000347547 IL19Q9UHD0 177 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 IGKV3D-15A0A087WSY6 115 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 TOX4O94842 621 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 UBALD2Q8IYN6 164 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 DEFB125Q8N687 156 aa12.98□□□□□ -0.33
LRP8-202ENST00000347547 TMEM30CPA0ZSE6 113 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 TNXAQ16473 311 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 SPATA31B1PQ5VZV4 182 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 ABHD3Q8WU67 409 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 COMMD5Q9GZQ3 224 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 NPVFQ9HCQ7 196 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 POLDIP2Q9Y2S7 368 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 CHTOPQ9Y3Y2 248 aaKnown RBP12.97□□□□□ -0.33
LRP8-202ENST00000347547 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
LRP8-202ENST00000347547 HSBP1O75506 76 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 Q56UQ5 140 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 MRPL54Q6P161 138 aaKnown RBP12.96□□□□□ -0.33
LRP8-202ENST00000347547 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 TMEM167BQ9NRX6 74 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 ZNHIT1O43257 154 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 FOXH1O75593 365 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 IGHV3-9P01782 118 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 COX6A1P12074 109 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 USF1P22415 310 aaPredicted RBP12.96□□□□□ -0.33
LRP8-202ENST00000347547 ARR3P36575 388 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 SLAQ13239 276 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 SPACA3Q8IXA5 215 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 STPG3Q8N7X2 389 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 OR52L2PQ8NGH6 319 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
LRP8-202ENST00000347547 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.33
LRP8-202ENST00000347547 A0A096LPE4 126 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 A0A1W2PPZ6 126 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 ZNF503-AS2A6NEH8 195 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 LINC00473A8K010 186 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 M0R2Z0 102 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 CRXO43186 299 aaPredicted RBP12.95□□□□□ -0.34
LRP8-202ENST00000347547 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
LRP8-202ENST00000347547 CGAP01215 116 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 PSG1P11464 419 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 CXCL12P48061 93 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 REG1BP48304 166 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 TCL1AP56279 114 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 SLC35B1P78383 322 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 FXYD3Q14802 87 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 SMIM12Q96EX1 92 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 RTL8AQ9BWD3 113 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 TECRQ9NZ01 308 aaKnown RBP12.95□□□□□ -0.34
LRP8-202ENST00000347547 K7ERU9 68 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 GFRA3O60609 400 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 OR2J3O76001 311 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 NPY1RP25929 384 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 CRYBB3P26998 211 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 RELBQ01201 579 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 MPV17L2Q567V2 206 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 BVES-AS1Q5T3Y7 98 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
LRP8-202ENST00000347547 SSMEM1Q8WWF3 244 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 NINJ1Q92982 152 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
LRP8-202ENST00000347547 SPOCK3Q9BQ16 436 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms