RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OVOL3O00110 214 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 ELLP55199 621 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 CCL20P78556 96 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 KLRD1Q13241 179 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 ETV3LQ6ZN32 361 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 BPESC1Q9GZL8 116 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 C9JQL5 133 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 TSPAN4O14817 238 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 ADCYAP1P18509 176 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 SNCAP37840 140 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 ATP6V1FQ16864 119 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 LDLRAD2Q5SZI1 272 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 IGFBPL1Q8WX77 278 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 ENY2Q9NPA8 101 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 VPS13CQ709C8 3753 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 IGLV2-23P01705 113 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 FGF7P21781 194 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 PAX6P26367 422 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 MOB3BQ86TA1 216 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 BEND2Q8NDZ0 799 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 AIFM2Q9BRQ8 373 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 PCGF1Q9BSM1 259 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 RPRMQ9NS64 109 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 INSIG2Q9Y5U4 225 aa18.13■□□□□ 0.49
PDLIM2-203ENST00000339162 A0A1W2PRD5 423 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 A0A1W2PRF3 423 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 A0A1W2PRM7 423 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 EIF3GO75821 320 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 IFNA4P05014 189 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 H2AFB1P0C5Y9 115 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 ATF4P18848 351 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 RPP30P78346 268 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 OR10W1Q8NGF6 305 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 TPSG1Q9NRR2 321 aa18.12■□□□□ 0.49
PDLIM2-203ENST00000339162 IGHV1-3A0A0C4DH29 117 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SLC25A17O43808 307 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 IGHV4-39P01824 125 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 RAB13P51153 203 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 LCN2P80188 198 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SLC24A4Q8NFF2 622 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SFT2D1Q8WV19 159 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SPG11Q96JI7 2443 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SMCO3A2RU48 225 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 E7EUB6 86 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 CA2P00918 260 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 MC5RP33032 325 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 PRCDQ00LT1 54 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 DEFA5Q01523 94 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 SPSB3Q6PJ21 355 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 RPEQ96AT9 228 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 PSMG3Q9BT73 122 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 PLEKHA3Q9HB20 300 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 ZNF257Q9Y2Q1 563 aa18.11■□□□□ 0.49
PDLIM2-203ENST00000339162 WNK2Q9Y3S1 2297 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 IGHV2-5P01817 119 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 CNTFRP26992 372 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 RPL8P62917 257 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 C10orf55Q5SWW7 151 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 PARD6GQ9BYG4 376 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 NPY1RP25929 384 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 CD1BP29016 333 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 VWC2Q2TAL6 325 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 COMMD5Q9GZQ3 224 aa18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 EIF5A2Q9GZV4 153 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-203ENST00000339162 PRSS46E5RG02 174 aa18.09■□□□□ 0.49
PDLIM2-203ENST00000339162 LY86O95711 162 aa18.09■□□□□ 0.49
PDLIM2-203ENST00000339162 CD5P06127 495 aa18.09■□□□□ 0.49
PDLIM2-203ENST00000339162 ATRAIDQ6UW56 229 aa18.09■□□□□ 0.49
PDLIM2-203ENST00000339162 FAM208BQ5VWN6 2430 aa18.09■□□□□ 0.49
PDLIM2-203ENST00000339162 F8W036 122 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 CTRB1P17538 263 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 DVL1P1P54792 670 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 GUK1Q16774 197 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 CTRB2Q6GPI1 263 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 SSX7Q7RTT5 188 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 CCL19Q99731 98 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 SCRT1Q9BWW7 348 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 NPCDR1Q9BY65 106 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 ZNF430Q9H8G1 570 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 HILPDAQ9Y5L2 63 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 PLXNB1O43157 2135 aa18.08■□□□□ 0.49
PDLIM2-203ENST00000339162 RAB11AP62491 216 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 TLE4Q04727 773 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 ZNF726P1Q15940 193 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 ACSM6Q6P461 480 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 LHFPL4Q7Z7J7 247 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 TMEM167AQ8TBQ9 72 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 PRELID1Q9Y255 219 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 LRRK2Q5S007 2527 aa18.08■□□□□ 0.48
PDLIM2-203ENST00000339162 LY6LH3BQJ8 138 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 M0R1W7 72 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 IGKV1D-33P01593 117 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 IGKV1-33P01594 117 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 USF1P22415 310 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 RAB2AP61019 212 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 SERF2P84101 59 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 HCP5Q6MZN7 132 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 OR5B3Q8NH48 314 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms