RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 APCDD1LQ8NCL9 501 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 NABP2Q9BQ15 211 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 OR11H12B2RN74 326 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 SP9P0CG40 484 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 HOXA5P20719 270 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
SHANK2-201ENST00000338508 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 OR11H1Q8NG94 326 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 UQCR10Q9UDW1 63 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 H7C1H1 209 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 CBLN4Q9NTU7 201 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 C7orf66A4D0T2 115 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 C1QCP02747 245 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 HMGA2P52926 109 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 PMCHL1Q16048 86 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 AICDAQ9GZX7 198 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 PLXNB2O15031 1838 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 LOC101059948A0A1B0GTJ6 334 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 CBLN1P23435 193 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF107Q9UII5 783 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-201ENST00000338508 SMIM6P0DI80 62 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 CD33P20138 364 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 APOBEC3AP31941 199 aaPredicted RBP10.03□□□□□ -0.8
SHANK2-201ENST00000338508 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM222Q9H0R3 208 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 CXorf51AA0A1B0GTR3 108 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 HMGCLL1Q8TB92 370 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 FOXJ2Q9P0K8 574 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 CACNA1IQ9P0X4 2223 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 RGPD4Q7Z3J3 1758 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 ASAH2BP0C7U1 165 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 SSC4DQ8WTU2 575 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 NRIP2Q9BQI9 281 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 C1QAP02745 245 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 APOHP02749 345 aaPredicted RBP10.03□□□□□ -0.8
SHANK2-201ENST00000338508 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
SHANK2-201ENST00000338508 ATP5LO75964 103 aa10.02□□□□□ -0.8
SHANK2-201ENST00000338508 SRSF7Q16629 238 aaKnown RBP eCLIP10.02□□□□□ -0.84e-9■■■■■ 29.7
SHANK2-201ENST00000338508 FOCADQ5VW36 1801 aa10.02□□□□□ -0.8
SHANK2-201ENST00000338508 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.8
SHANK2-201ENST00000338508 NPIPB8E9PQR5 432 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 NPIPB9F8W1W9 429 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 NPIPB7O75200 414 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 A0A1W2PQF6 199 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 CXCL2P19875 107 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 ASCL4Q6XD76 172 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 TCF19Q9Y242 345 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 TRPM3Q9HCF6 1732 aaPredicted RBP10.02□□□□□ -0.81
SHANK2-201ENST00000338508 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
SHANK2-201ENST00000338508 PAX2Q02962 417 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 JMJD8Q96S16 334 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 A0A1W2PPC1 479 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 B9A039 149 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 LINC00614P0C842 121 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 TMEM91Q6ZNR0 172 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 ZNF818PQ6ZRF7 136 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 SLC25A45Q8N413 288 aa10.02□□□□□ -0.81
SHANK2-201ENST00000338508 SLC17A3O00476 420 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 CD8AP01732 235 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 EVI2AP22794 236 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
SHANK2-201ENST00000338508 LY6DQ14210 128 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 LRTM2Q8N967 370 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 ABCA3Q99758 1704 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 ABCA7Q8IZY2 2146 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 ALPK2Q86TB3 2170 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 PTP4A3O75365 173 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 MT-ND6P03923 174 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 AMELYQ99218 206 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 GP6Q9HCN6 339 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
SHANK2-201ENST00000338508 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 CGAP01215 116 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 CTAG1AP78358 180 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 TRAV8-2A0A0B4J237 113 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 PRSS53Q2L4Q9 553 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 OR10J3Q5JRS4 329 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 Q5PR19 223 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 TMEM186Q96B77 213 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 LINC00527Q9UJ94 153 aa10.01□□□□□ -0.81
SHANK2-201ENST00000338508 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
SHANK2-201ENST00000338508 FHITP49789 147 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 CEP250Q9BV73 2442 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 TRAV2A0A0B4J234 112 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 IFNL4K9M1U5 179 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 ZNF79Q15937 498 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 DDA1Q9BW61 102 aa10□□□□□ -0.81
SHANK2-201ENST00000338508 SFXN3Q9BWM7 321 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms