RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 TRAPPC1Q9Y5R8 145 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 IGKV1D-17A0A075B6S4 117 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 GOSR1O95249 250 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 TNFSF10P50591 281 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 CNN1P51911 297 aaKnown RBP14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 PDLIM3Q53GG5 364 aaPredicted RBP14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 PXMP4Q9Y6I8 212 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 PCNX1Q96RV3 2341 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 A8MWP6 167 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 FRMD6-AS1P0C7T7 363 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 DUX4L9Q6RFH8 374 aaPredicted RBP14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 TMEM178AQ8NBL3 297 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 RNASEH2CQ8TDP1 164 aaKnown RBP14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 HINT2Q9BX68 163 aa14.37□□□□□ -0.11
PTP4A3-201ENST00000329397 MORN2Q502X0 79 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 COA6Q5JTJ3 125 aaKnown RBP14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 KCNIP4Q6PIL6 250 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 GGTLC1Q9BX51 225 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 SEPSECSQ9HD40 501 aaKnown RBP14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 YTHDF2Q9Y5A9 579 aaKnown RBP14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 SLC17A3O00476 420 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 FOXH1O75593 365 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 FDCSPQ8NFU4 85 aa14.36□□□□□ -0.11
PTP4A3-201ENST00000329397 VENTXO95231 258 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 SRP14P37108 136 aaKnown RBP14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 CISD2Q8N5K1 135 aaKnown RBP14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 C1orf159Q96HA4 380 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 TMEM140Q9NV12 185 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 PKDREJQ9NTG1 2253 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 TMEM238C9JI98 176 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 GFRA3O60609 400 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 ACTL6BO94805 426 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 RPL15P61313 204 aaKnown RBP14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 HLA-DRB5Q30154 266 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 ACY3Q96HD9 319 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 SFRP2Q96HF1 295 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 GAL3ST2Q9H3Q3 398 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 PARD6AQ9NPB6 346 aa14.35□□□□□ -0.11
PTP4A3-201ENST00000329397 IGHV1-18A0A0C4DH31 117 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 F6UZH7 168 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 ZNF883P0CG24 379 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 PDLIM4P50479 330 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 OCC1Q8TAD7 63 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 PRR7Q8TB68 274 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 TMEM18Q96B42 140 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 IGHV2OR16-5A0A0B4J2B6 119 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 PDE6DO43924 150 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 SCGB1D1O95968 90 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 CBLN1P23435 193 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 ZNF718Q3SXZ3 478 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 TEX38Q6PEX7 206 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 MOB3BQ86TA1 216 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 ZNRD1Q9P1U0 126 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 HPRT1P00492 218 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 ADMP35318 185 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 VDAC2P45880 294 aaPredicted RBP14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 RELBQ01201 579 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 PAX5Q02548 391 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 ARSJQ5FYB0 599 aaPredicted RBP14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 DIRC2Q96SL1 478 aa14.34□□□□□ -0.11
PTP4A3-201ENST00000329397 PLXNB1O43157 2135 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 MDFIC2A0A1B0GVS7 189 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 TYMSP04818 313 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 TMEM144Q7Z5S9 345 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 GBGT1Q8N5D6 347 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 IFI27L2Q9H2X8 130 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 KCNIP2Q9NS61 270 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 TCF19Q9Y242 345 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 ATMQ13315 3056 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 KALRNO60229 2985 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 CDKN1BP46527 198 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 GAGE1Q13065 139 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 S100A7AQ86SG5 101 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 MOGAT3Q86VF5 341 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 CBLN4Q9NTU7 201 aa14.33□□□□□ -0.12
PTP4A3-201ENST00000329397 DSCAML1Q8TD84 2053 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 NAV3Q8IVL0 2385 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 PRSS46E5RG02 174 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 SPINK4O60575 86 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 LOXL3P58215 753 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 ERVK-16P61578 105 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 GCSAMQ8N6F7 178 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 TNFRSF14Q92956 283 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 S1PR3Q99500 378 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 ELOVL5Q9NYP7 299 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 MKRN2OSH3BPM6 223 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 K7EN84 100 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 NDUFS8O00217 210 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 SPRY3O43610 288 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 ADH4P08319 380 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 SP9P0CG40 484 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 STAG3L3P0CL85 134 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 PAX1P15863 534 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 ZNF83P51522 516 aa14.32□□□□□ -0.12
PTP4A3-201ENST00000329397 RPL31P62899 125 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms