RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LILRB2Q8N423 598 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 OR4A5Q8NH83 315 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 TIMM23O14925 209 aa18.4■□□□□ 0.54
PTX3-201ENST00000295927 SLC25A17O43808 307 aa18.4■□□□□ 0.54
PTX3-201ENST00000295927 VMA21Q3ZAQ7 101 aa18.4■□□□□ 0.54
PTX3-201ENST00000295927 LRRC20Q8TCA0 184 aa18.4■□□□□ 0.54
PTX3-201ENST00000295927 HINT2Q9BX68 163 aa18.4■□□□□ 0.54
PTX3-201ENST00000295927 OPN1MWP04001 364 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 OPN1MW2P0DN77 364 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 OPN1MW3P0DN78 364 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 RPL8P62917 257 aaKnown RBP18.39■□□□□ 0.53
PTX3-201ENST00000295927 COMMD7Q86VX2 200 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 CITED4Q96RK1 184 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 IFNA10P01566 189 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 ATP6V0CP27449 155 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 SULT1A2P50226 295 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 RPP30P78346 268 aaKnown RBP18.39■□□□□ 0.53
PTX3-201ENST00000295927 PRCDQ00LT1 54 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 CLEC12BQ2HXU8 276 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 ENY2Q9NPA8 101 aa18.39■□□□□ 0.53
PTX3-201ENST00000295927 CELSR2Q9HCU4 2923 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 IFNA5P01569 189 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 PAX6P26367 422 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 CNTFRP26992 372 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 OR10P1Q8NGE3 313 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 OR5B3Q8NH48 314 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 TPSG1Q9NRR2 321 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 RFNGQ9Y644 331 aa18.38■□□□□ 0.53
PTX3-201ENST00000295927 UBE2E1P51965 193 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 LGALS4P56470 323 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 MINOS1Q5TGZ0 78 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 CFHR4Q92496 578 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 COMMD5Q9GZQ3 224 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 ZNF430Q9H8G1 570 aaPredicted RBP18.37■□□□□ 0.53
PTX3-201ENST00000295927 MED9Q9NWA0 146 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 MINOS1-NBL1R4GNA1 71 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 ANKRD17O75179 2603 aaKnown RBP18.37■□□□□ 0.53
PTX3-201ENST00000295927 CENPEQ02224 2701 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 ZNF705EA8MWA4 302 aaPredicted RBP18.37■□□□□ 0.53
PTX3-201ENST00000295927 SSX2Q16385 188 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 SLC25A24Q6NUK1 477 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 TEX45Q8NA69 505 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 PLEKHA3Q9HB20 300 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 VPS13CQ709C8 3753 aa18.37■□□□□ 0.53
PTX3-201ENST00000295927 TEX46H3BTG2 121 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 RRHO14718 337 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 VENTXO95231 258 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 CD1BP29016 333 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 RUNX1Q01196 453 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 PAX8Q06710 450 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 HABP2Q14520 560 aaPredicted RBP18.36■□□□□ 0.53
PTX3-201ENST00000295927 PSG5Q15238 335 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 ATP6V1FQ16864 119 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 MRGPRG-AS1Q2M3A8 158 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 THNSL2Q86YJ6 484 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 DYNAPQ8N1N2 210 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 TMEM170AQ8WVE7 144 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 PINX1Q96BK5 328 aaKnown RBP18.36■□□□□ 0.53
PTX3-201ENST00000295927 PFDN2Q9UHV9 154 aa18.36■□□□□ 0.53
PTX3-201ENST00000295927 CRYGBP07316 175 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 OR8U8P0C7N1 319 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 S100A1P23297 94 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 OR1L8Q8NGR8 309 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 C17orf50Q8WW18 174 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 GNPNAT1Q96EK6 184 aaPredicted RBP18.35■□□□□ 0.53
PTX3-201ENST00000295927 NDUFA4L2Q9NRX3 87 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 DOPEY2Q9Y3R5 2298 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 SLC25A16P16260 332 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 PJVKQ0ZLH3 352 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 OR2G3Q8NGZ4 309 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 RNF5Q99942 180 aa18.35■□□□□ 0.53
PTX3-201ENST00000295927 OOSP1A8MZH6 123 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 SCAF4O95104 1147 aaKnown RBP18.34■□□□□ 0.53
PTX3-201ENST00000295927 LRRC75BQ2VPJ9 315 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 CCDC144NLQ6NUI1 221 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 ETV3LQ6ZN32 361 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 SLC24A4Q8NFF2 622 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 SCGB1C1Q8TD33 95 aa18.34■□□□□ 0.53
PTX3-201ENST00000295927 SAT2Q96F10 170 aaPredicted RBP18.34■□□□□ 0.53
PTX3-201ENST00000295927 TBL2Q9Y4P3 447 aaKnown RBP18.34■□□□□ 0.53
PTX3-201ENST00000295927 UBE2L5PA0A1B0GUS4 154 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 E7EUB6 86 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 TMEM182Q6ZP80 229 aaPredicted RBP18.33■□□□□ 0.53
PTX3-201ENST00000295927 OR10W1Q8NGF6 305 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 PSMG3-AS1Q96PY0 264 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 TMEM147Q9BVK8 224 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 REG4Q9BYZ8 158 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 SIGLEC9Q9Y336 463 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 PTPN13Q12923 2485 aa18.33■□□□□ 0.53
PTX3-201ENST00000295927 NPY1RP25929 384 aa18.33■□□□□ 0.52
PTX3-201ENST00000295927 RAB11AP62491 216 aa18.33■□□□□ 0.52
PTX3-201ENST00000295927 C10orf55Q5SWW7 151 aa18.33■□□□□ 0.52
PTX3-201ENST00000295927 PARD6GQ9BYG4 376 aaPredicted RBP18.33■□□□□ 0.52
PTX3-201ENST00000295927 WDR61Q9GZS3 305 aaKnown RBP18.33■□□□□ 0.52
PTX3-201ENST00000295927 UQCC1Q9NVA1 299 aa18.33■□□□□ 0.52
PTX3-201ENST00000295927 BEX4Q9NWD9 120 aaPredicted RBP18.33■□□□□ 0.52
PTX3-201ENST00000295927 METTL1Q9UBP6 276 aaKnown RBP18.33■□□□□ 0.52
PTX3-201ENST00000295927 CGB1A6NKQ9 187 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 CA2P00918 260 aa18.32■□□□□ 0.52
PTX3-201ENST00000295927 IGKV1D-33P01593 117 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms