RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 IGKV1D-33P01593 117 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 IGKV1-33P01594 117 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 CD1BP29016 333 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 ELLP55199 621 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-201ENST00000269318 OR4C13Q8NGP0 309 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 KPTNQ9Y664 436 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 TEX50A0A1B0GTY4 177 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 IL3RAP26951 378 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 HNF4GQ14541 408 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 HLA-DRB5Q30154 266 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 RPP25LQ8N5L8 163 aaKnown RBP13.47□□□□□ -0.25
CCDC40-201ENST00000269318 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 FKBP11Q9NYL4 201 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 WASHC3Q9Y3C0 194 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
CCDC40-201ENST00000269318 FAM74A7A6NL05 159 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 SNAPINO95295 136 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 NPBWR1P48145 328 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 RAB2AP61019 212 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 RAB11AP62491 216 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 FAM74A3Q4VXF1 159 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 BEND2Q8NDZ0 799 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 CLDND2Q8NHS1 167 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 CLEC7AQ9BXN2 247 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 SLC35B3Q9H1N7 401 aa13.47□□□□□ -0.25
CCDC40-201ENST00000269318 PATZ1Q9HBE1 687 aaKnown RBP13.47□□□□□ -0.25
CCDC40-201ENST00000269318 A6NNC1 897 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 NPY1RP25929 384 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 RAB13P51153 203 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 PRRX1P54821 245 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 DLK1P80370 383 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 PLEKHA3Q9HB20 300 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 ENY2Q9NPA8 101 aa13.46□□□□□ -0.25
CCDC40-201ENST00000269318 CA2P00918 260 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 LIPFP07098 398 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 MC5RP33032 325 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 CDKN1AP38936 164 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 PRB3Q04118 309 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-201ENST00000269318 ZNF506Q5JVG8 444 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 OR4A5Q8NH83 315 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 TMEM167AQ8TBQ9 72 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 HINT2Q9BX68 163 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 UBTD1Q9HAC8 227 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 CFAP46Q8IYW2 2715 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 BUB1B-PAK6H3BSN5 160 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
CCDC40-201ENST00000269318 MBP02144 154 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 OPN1MWP04001 364 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 IFNA4P05014 189 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 OPN1MW2P0DN77 364 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 OPN1MW3P0DN78 364 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 USF1P22415 310 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-201ENST00000269318 ICAM4Q14773 271 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 HAGHQ16775 308 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 ZNF787Q6DD87 383 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 LCN15Q6UWW0 184 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
CCDC40-201ENST00000269318 C17orf112F2Z3M2 114 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 MPDU1O75352 247 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 RPL8P62917 257 aaKnown RBP13.44□□□□□ -0.26
CCDC40-201ENST00000269318 BSXQ3C1V8 233 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 FFAR4Q5NUL3 377 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 CLRN3Q8NCR9 226 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 OR4P4Q8NGL7 312 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 VSTM2AQ8TAG5 236 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 C1orf159Q96HA4 380 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 NDUFA4L2Q9NRX3 87 aa13.44□□□□□ -0.26
CCDC40-201ENST00000269318 hCG_1809904A0A1W2PP81 198 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 A0A1W2PPE2 198 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 A0A1W2PR64 198 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 A0A1W2PRV1 198 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 MAP1LC3B2A6NCE7 125 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 NDUFS7O75251 213 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 FGF8P55075 233 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 ARSJQ5FYB0 599 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 RITA1Q96K30 269 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 MAP1LC3BQ9GZQ8 125 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 ONECUT1Q9UBC0 465 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 LSM4Q9Y4Z0 139 aaKnown RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 IGSF10Q6WRI0 2623 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 SRP19P09132 144 aaKnown RBP13.43□□□□□ -0.26
CCDC40-201ENST00000269318 COX7A1P24310 79 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 OR10G4Q8NGN3 311 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 OR10G9Q8NGN4 311 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 OR10G7Q8NGN6 311 aa13.43□□□□□ -0.26
CCDC40-201ENST00000269318 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 INS-IGF2F8WCM5 200 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 OR13C7P0DN81 318 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-201ENST00000269318 MRGPRG-AS1Q2M3A8 158 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 KHDC3LQ587J8 217 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 MGST2Q99735 147 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 COMMD5Q9GZQ3 224 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms