RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 MS4A5Q9H3V2 200 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 CCL2P13500 99 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 GZMMP51124 257 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 OR4D11Q8NGI4 311 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 NPFFO15130 113 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 RIPPLY3P57055 190 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 GPBAR1Q8TDU6 330 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
AFF4-201ENST00000265343 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 TRGV8A0A0C4DH27 118 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
AFF4-201ENST00000265343 GPX1P07203 203 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 SSTR5P35346 364 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 CACNG7P62955 275 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 PAX2Q02962 417 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
AFF4-201ENST00000265343 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 TRBV7-9A0A0J9YWB2 115 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 COL10A1Q03692 680 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 J3KRW8 73 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 KIAA1644Q3SXP7 199 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 WDR54Q9H977 334 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 FSCN3Q9NQT6 498 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 A0A1W2PP11 408 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 NDUFA2O43678 99 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 DPM2O94777 84 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 ATP5L2Q7Z4Y8 100 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 DMRTA2Q96SC8 542 aa12.87□□□□□ -0.35
AFF4-201ENST00000265343 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 CXorf66Q5JRM2 361 aaPredicted RBP12.86□□□□□ -0.35
AFF4-201ENST00000265343 FBXW9Q5XUX1 488 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 WNT2BQ93097 391 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 TMEM187Q14656 261 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 DEFB109BQ30KR1 87 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 PHLDA1Q8WV24 401 aaPredicted RBP12.86□□□□□ -0.35
AFF4-201ENST00000265343 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 NKX2-8O15522 239 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 CCL7P80098 99 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 TIMP4Q99727 224 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 SYNGR3O43761 229 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 ATXN8Q156A1 80 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
AFF4-201ENST00000265343 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
AFF4-201ENST00000265343 FAM159AQ6UWV7 190 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 TNFSF13O75888 250 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 KLK15Q9H2R5 256 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 RLFQ13129 1914 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
AFF4-201ENST00000265343 RASL10BQ96S79 203 aa12.86□□□□□ -0.35
AFF4-201ENST00000265343 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
AFF4-201ENST00000265343 ZNF708P17019 499 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 OR5AN1Q8NGI8 311 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 LRRC37AA6NMS7 1700 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 STARD6P59095 220 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
AFF4-201ENST00000265343 PEX7O00628 323 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 Q96M66 194 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
AFF4-201ENST00000265343 SERF1AO75920 110 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 FOXC2Q99958 501 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
AFF4-201ENST00000265343 CTGFP29279 349 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 LOXL3P58215 753 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 CXCL16Q9H2A7 254 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 C1QAP02745 245 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 SHISA5Q8N114 240 aa12.85□□□□□ -0.35
AFF4-201ENST00000265343 LIFP15018 202 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 CT83Q5H943 113 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 PLAC1Q9HBJ0 212 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 KIR3DL3Q8N743 410 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 TCF20Q9UGU0 1960 aaKnown RBP12.84□□□□□ -0.35
AFF4-201ENST00000265343 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 PAX1P15863 534 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 MAJINQ3KP22 176 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
AFF4-201ENST00000265343 C1QL3Q5VWW1 255 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 VN1R4Q7Z5H5 301 aa12.84□□□□□ -0.35
AFF4-201ENST00000265343 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms