RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TRAV24A0A0B4J272 114 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 IGLL1P15814 213 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 CTSSP25774 331 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 NPY1RP25929 384 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 FKBP2P26885 142 aaKnown RBP13.67□□□□□ -0.22
GPC1-201ENST00000264039 HOXC12P31275 282 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
GPC1-201ENST00000264039 ZNF585BQ52M93 769 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 BPIFA4PQ86YQ2 179 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 OR8A1Q8NGG7 326 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
GPC1-201ENST00000264039 TIMM9Q9Y5J7 89 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 PCNX1Q96RV3 2341 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 OR5AL1P0C617 328 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 SSTR5P35346 364 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 C10orf128Q5T292 105 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 CRIP3Q6Q6R5 217 aa13.67□□□□□ -0.22
GPC1-201ENST00000264039 CD27P26842 260 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 C12orf54Q6X4T0 127 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 MIR17HGQ75NE6 70 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TUSC5Q8IXB3 177 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 DCTN5Q9BTE1 182 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 DUSP13Q9UII6 198 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TRIOO75962 3097 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TMEM30CPA0ZSE6 113 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 AMY1AP04745 511 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TEPPQ6URK8 271 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 TAAR6Q96RI8 345 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 SERTM2A0A1B0GWG4 89 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 H3BUT2 72 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 HBZP02008 142 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
GPC1-201ENST00000264039 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 DEFB108BQ8NET1 73 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 LEAP2Q969E1 77 aa13.66□□□□□ -0.22
GPC1-201ENST00000264039 FOXG1P55316 489 aaPredicted RBP13.65□□□□□ -0.22
GPC1-201ENST00000264039 TMEM14EPQ6UXP3 125 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 RBMXL3Q8N7X1 1067 aaKnown RBP13.65□□□□□ -0.22
GPC1-201ENST00000264039 ZNF441Q8N8Z8 693 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 TSKUQ8WUA8 353 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 POLDIP2Q9Y2S7 368 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 ZNF138P52744 262 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 STRADBQ9C0K7 418 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 SAP30LQ9HAJ7 183 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
GPC1-201ENST00000264039 SAP30O75446 220 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 CRYGSP22914 178 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 AARDQ4LEZ3 155 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 LINC00479Q96M42 142 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
GPC1-201ENST00000264039 LIFP15018 202 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 TAS2R45P59539 299 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 SELENOVP59797 346 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 LINC00869P0C866 280 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 DNASE2BQ8WZ79 361 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 SMIM12Q96EX1 92 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 WNT9BO14905 357 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 HAND1O96004 215 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 WNT2P09544 360 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 HTR1DP28221 377 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 GUSBP11Q6P575 273 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 LHFPL4Q7Z7J7 247 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 ZIC4Q8N9L1 334 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 C11orf1Q9H5F2 150 aa13.64□□□□□ -0.23
GPC1-201ENST00000264039 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
GPC1-201ENST00000264039 TRAV30A0A087WSZ9 112 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 CCR5P51681 352 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 MED12LQ86YW9 2145 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 LOC389332A0A1B0GUA5 103 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 A0A1W2PN81 502 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 IGFBP2P18065 325 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 LYSMD4Q5XG99 296 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 PRSS3P2Q8NHM4 247 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 IGHV1-69-2A0A0G2JMI3 117 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 ISLRO14498 428 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 PLXNB1O43157 2135 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 TIMM8AO60220 97 aaPredicted RBP13.63□□□□□ -0.23
GPC1-201ENST00000264039 NMUP48645 174 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
GPC1-201ENST00000264039 CELSR3Q9NYQ7 3312 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A26D6RGX4 464 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
GPC1-201ENST00000264039 LINC00271P0C7V0 271 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 PAX1P15863 534 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 LGALS4P56470 323 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
GPC1-201ENST00000264039 TP53TG3Q9ULZ0 132 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 C7orf71A4D174 169 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms