RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 OR4A5Q8NH83 315 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 RASL11BQ9BPW5 248 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 PLSCR3Q9NRY6 295 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 NSG2Q9Y328 171 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 TRAV3A0A0B4J244 114 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 UPK2O00526 184 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 KBTBD11O94819 623 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 RELBQ01201 579 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 PLGLAQ15195 96 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 KRTAP24-1Q3LI83 254 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 TEX45Q8NA69 505 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 PPP1R1CQ8WVI7 109 aa16.43■□□□□ 0.22
RTCA-201ENST00000260563 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.43■□□□□ 0.22
RTCA-201ENST00000260563 RRHO14718 337 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 RBMXL2O75526 392 aaKnown RBP16.42■□□□□ 0.22
RTCA-201ENST00000260563 SNAPC5O75971 98 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 SCGB1D2O95969 90 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 AMY1AP04745 511 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 CRYGBP07316 175 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 OR2B8PP59922 312 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 LRRC37A5PQ49AS3 106 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 Q6ZSV7 163 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 TAF15Q92804 592 aaKnown RBP eCLIP16.42■□□□□ 0.22
RTCA-201ENST00000260563 PRSS22Q9GZN4 317 aa16.42■□□□□ 0.22
RTCA-201ENST00000260563 METTL1Q9UBP6 276 aaKnown RBP16.42■□□□□ 0.22
RTCA-201ENST00000260563 SMLR1H3BR10 107 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 HKR1P10072 659 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 NKX2-1P43699 371 aaPredicted RBP16.41■□□□□ 0.22
RTCA-201ENST00000260563 BLCAPP62952 87 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 FOXRED2Q8IWF2 684 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 TMEM167AQ8TBQ9 72 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 FBXL15Q9H469 300 aa16.41■□□□□ 0.22
RTCA-201ENST00000260563 SH2D7A6NKC9 451 aaPredicted RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 C15orf61A6NNL5 157 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 TSPAN9O75954 239 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 NXPH3O95157 252 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 NDUFA7O95182 113 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 FGL1Q08830 312 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 RAB32Q13637 225 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 ARSJQ5FYB0 599 aaPredicted RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 CXorf66Q5JRM2 361 aaPredicted RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 C9orf152Q5JTZ5 239 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 TMEM158Q8WZ71 300 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 QTRT1Q9BXR0 403 aaKnown RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 ZNF702PQ9H963 129 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 TPSG1Q9NRR2 321 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 PRNDQ9UKY0 176 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 SIGLEC9Q9Y336 463 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 MBPP02686 304 aaPredicted RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 PSMB6P28072 239 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 S100A10P60903 97 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 ID3Q02535 119 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 AARDQ4LEZ3 155 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 Q5BKY6 102 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 ZNF429Q86V71 674 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 OR4F5Q8NH21 305 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 ZFP57Q9NU63 452 aa16.4■□□□□ 0.22
RTCA-201ENST00000260563 FOXA2Q9Y261 457 aaPredicted RBP16.4■□□□□ 0.22
RTCA-201ENST00000260563 FAM90A26D6RGX4 464 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 G3V3Q6 166 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 ST8SIA3O43173 380 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 MPC2O95563 127 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 RPL8P62917 257 aaKnown RBP16.39■□□□□ 0.21
RTCA-201ENST00000260563 PPP1R27Q86WC6 154 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 OR2T6Q8NHC8 308 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 ZNF430Q9H8G1 570 aaPredicted RBP16.39■□□□□ 0.21
RTCA-201ENST00000260563 TMEM14BQ9NUH8 114 aa16.39■□□□□ 0.21
RTCA-201ENST00000260563 LSM5Q9Y4Y9 91 aaKnown RBP16.39■□□□□ 0.21
RTCA-201ENST00000260563 ATRQ13535 2644 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 TRAV14DV4A0A0A6YYC5 116 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 K7EPK0 472 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 HLA-DRB1P01911 266 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 FGF2P09038 288 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 MRGPRG-AS1Q2M3A8 158 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 Q6ZS46 218 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 MMD2Q8IY49 270 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 Q8N2B8 174 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 OR52E5Q8NH55 327 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 C19orf24Q9BVV8 132 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 FKBP11Q9NYL4 201 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 HSPB7Q9UBY9 170 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 CACFD1Q9UGQ2 172 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 OR51B2Q9Y5P1 312 aa16.38■□□□□ 0.21
RTCA-201ENST00000260563 PET100P0DJ07 73 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 TNFRSF9Q07011 255 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 PRSS8Q16651 343 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 CLCC1Q96S66 551 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 MAGT1Q9H0U3 335 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 C16orf95Q9H693 158 aa16.37■□□□□ 0.21
RTCA-201ENST00000260563 PLXNB1O43157 2135 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 KCNAB3O43448 404 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 IFNA17P01571 189 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 C1QBP02746 253 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 POLR2GP62487 172 aaKnown RBP eCLIP16.36■□□□□ 0.21
RTCA-201ENST00000260563 C11orf87Q6NUJ2 197 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 THAP6Q8TBB0 222 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 COMMD5Q9GZQ3 224 aa16.36■□□□□ 0.21
RTCA-201ENST00000260563 RCL1Q9Y2P8 373 aaKnown RBP16.36■□□□□ 0.21
RTCA-201ENST00000260563 ZNF257Q9Y2Q1 563 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms