RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 A0A0G2JLM5 398 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 HSPB1P04792 205 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 ZNF735P0CB33 412 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 AREGP15514 252 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 SLURP1P55000 103 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 ERVK-16P61578 105 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 ZNF45Q02386 682 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 SCGB2B2Q4G0G5 96 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 C19orf35Q6ZS72 473 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 DCUN1D4Q92564 292 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 GPR61Q9BZJ8 451 aa13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-201ENST00000254193 ANKRD34BA5PLL1 514 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 SEC14L6B5MCN3 397 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 ZNF701M0R085 212 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 GSTZ1O43708 216 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 G6PCP35575 357 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 OR2B8PP59922 312 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 RHOGP84095 191 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 MEF2DQ14814 521 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 DLX4Q92988 240 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 AKIP1Q9NQ31 210 aa13.85□□□□□ -0.19
SNRPA1-201ENST00000254193 DPPA5A6NC42 116 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 AKAIN1P0CW23 69 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 PIGPP57054 158 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 EGFEM1PQ0D2K5 195 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 REC114Q7Z4M0 266 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 SLC25A42Q86VD7 318 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 OR4C16Q8NGL9 310 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 OR13C8Q8NGS7 320 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 MARCH1Q8TCQ1 289 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 MRGPRFQ96AM1 343 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 USMG5Q96IX5 58 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 COMMD5Q9GZQ3 224 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 ZNF257Q9Y2Q1 563 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
SNRPA1-201ENST00000254193 TNCP24821 2201 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 TRBV9A0A0B4J1U6 114 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 DISC1C4P0D8 188 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 IGKV1-39P01597 117 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 IGKV1D-39P04432 117 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 REG1AP05451 166 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 S100A5P33763 92 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 RND3P61587 244 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 ZNF486Q96H40 463 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 RANGRFQ9HD47 186 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 FAM212BQ9NTI7 297 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-201ENST00000254193 ANKRD20A5PA0PJZ0 165 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 FAM223BA6NKX1 122 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 OVOL1O14753 267 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 OR2J3O76001 311 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 TRBV12-3P01733 135 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 PSMB6P28072 239 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 ATP5G2Q06055 141 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 PYDC2Q56P42 97 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 C9orf66Q5T8R8 295 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 FAM223AQ8IWN6 122 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 THAP7Q9BT49 309 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 V9GYH0 126 aa13.82□□□□□ -0.2
SNRPA1-201ENST00000254193 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 SNAPC5O75971 98 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 SERPINE2P07093 398 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 CRYGCP07315 174 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 CADM3Q8N126 398 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 NECAP1Q8NC96 275 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 OR10W1Q8NGF6 305 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 OR51S1Q8NGJ8 323 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 TP53RKQ96S44 253 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 QTRT1Q9BXR0 403 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 PEF1Q9UBV8 284 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-201ENST00000254193 WI2-2373I1.2A0A1W2PRP0 233 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 H0Y980 276 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 CTSDP07339 412 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 FGF2P09038 288 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 TRAPPC2P0DI81 140 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 TRAPPC2BP0DI82 140 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 CTRB1P17538 263 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 EXOSC2Q13868 293 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 C15orf32Q32M92 178 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 SP6Q3SY56 376 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 CTRB2Q6GPI1 263 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 CCDC190Q86UF4 302 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 FANCD2OSQ96PS1 177 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 HINT2Q9BX68 163 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 FBXL7Q9UJT9 491 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 OR51B2Q9Y5P1 312 aa13.8□□□□□ -0.2
SNRPA1-201ENST00000254193 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
SNRPA1-201ENST00000254193 DBX1A6NMT0 343 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms