RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 IRF2P14316 349 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 CRISP2P16562 243 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 FXYD3Q14802 87 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 ARSJQ5FYB0 599 aaPredicted RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 SIGLECL1Q8N7X8 197 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 ZNF439Q8NDP4 499 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 ACTR3CQ9C0K3 210 aaPredicted RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 LRBAP50851 2863 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 TRBV24-1A0A075B6N3 115 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 IGHV2OR16-5A0A0B4J2B6 119 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 CCL11P51671 97 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 CYP2G1PQ6ZSU1 146 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 NHLRC2Q8NBF2 726 aa8.38□□□□□ -1.07
COPB1-201ENST00000249923 RBM14Q96PK6 669 aaKnown RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 OPN3Q9H1Y3 402 aaPredicted RBP8.38□□□□□ -1.07
COPB1-201ENST00000249923 PRSS46E5RG02 174 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CGAP01215 116 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 GNG10P50151 68 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 DUX4L9Q6RFH8 374 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 Q6ZN92 141 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 TMEM178AQ8NBL3 297 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 TAAR6Q96RI8 345 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 SRD5A3Q9H8P0 318 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 PLEKHA3Q9HB20 300 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 KBTBD11O94819 623 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 HRASP01112 189 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 DUTP33316 252 aaKnown RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 LOXL3P58215 753 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 RPL39P5Q59GN2 51 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 RPRMLQ8N4K4 120 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 ZBTB34Q8NCN2 500 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 NEIL1Q96FI4 390 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 TMEM147Q9BVK8 224 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CXXC4Q9H2H0 198 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 TNCP24821 2201 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 RAI1Q7Z5J4 1906 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 IGHV3OR15-7A0A075B7D8 119 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 RNF212BA8MTL3 300 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 C22orf34Q6ZV56 151 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 ST6GALNAC6Q969X2 333 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CIB3Q96Q77 187 aaPredicted RBP8.37□□□□□ -1.07
COPB1-201ENST00000249923 PYGO2Q9BRQ0 406 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 GNG12Q9UBI6 72 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 CBY1Q9Y3M2 126 aa8.37□□□□□ -1.07
COPB1-201ENST00000249923 SNURFLB1AK76 121 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 RAB29O14966 203 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 TIMM8AO60220 97 aaPredicted RBP8.36□□□□□ -1.07
COPB1-201ENST00000249923 NUPR1O60356 82 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 STARD4Q96DR4 205 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 NOL4LQ96MY1 436 aaPredicted RBP8.36□□□□□ -1.07
COPB1-201ENST00000249923 CTXND1A0A1B0GTU2 59 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 RRHO14718 337 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 TOX4O94842 621 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 MMDQ15546 238 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 VAMP3Q15836 100 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 IGFL2Q6UWQ7 119 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 GCSAMQ8N6F7 178 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 ZNRF1Q8ND25 227 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 LRRC29Q8WV35 223 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 LEAP2Q969E1 77 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 VPS25Q9BRG1 176 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 ASCL3Q9NQ33 180 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 ZNF71Q9NQZ8 489 aaPredicted RBP8.36□□□□□ -1.07
COPB1-201ENST00000249923 OR6C3Q9NZP0 311 aa8.36□□□□□ -1.07
COPB1-201ENST00000249923 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 IL3RAP26951 378 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 ACOT6Q3I5F7 207 aaPredicted RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 FAM201AQ5SY85 155 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 LOXL4Q96JB6 756 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 DIRC2Q96SL1 478 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 TMEM208Q9BTX3 173 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 OR7C2O60412 319 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 TRIP6Q15654 476 aaKnown RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 MORN2Q502X0 79 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 MBNL2Q5VZF2 373 aaKnown RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 IFI27L2Q9H2X8 130 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 PRDX2P32119 198 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 PRAMEF5Q5TYX0 476 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 VHLLQ6RSH7 139 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 DNAJC4Q9NNZ3 241 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 PLSCR4Q9NRQ2 329 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 TECRQ9NZ01 308 aaKnown RBP8.35□□□□□ -1.07
COPB1-201ENST00000249923 DUSP13Q9UII6 198 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms