RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 GMPPAQ96IJ6 420 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-227ENST00000640957 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 DYSFO75923 2080 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 GRPP07492 148 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 CLDN15P56746 228 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 UBE2V1Q13404 147 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 TSPOP30536 169 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 FOXL1Q12952 345 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 OR2M7Q8NG81 312 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 RNF2Q99496 336 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 DCTN5Q9BTE1 182 aa11.5□□□□□ -0.57
SCARB2-227ENST00000640957 TECRQ9NZ01 308 aaKnown RBP11.5□□□□□ -0.57
SCARB2-227ENST00000640957 DMXL2Q8TDJ6 3036 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 LRP4O75096 1905 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 VENTXO95231 258 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 GOSR1O95249 250 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 CGAP01215 116 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 CRYBB3P26998 211 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 PCOLCEQ15113 449 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 ACSF3Q4G176 576 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 FOXL2NBQ6ZUU3 175 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 OR10D3Q8NH80 312 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 CDX2Q99626 313 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 ACACAQ13085 2346 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 K7ESF4 209 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 LIFP15018 202 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 DSCR4P56555 118 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 PLGLB1Q02325 96 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 MPV17L2Q567V2 206 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 SLC25A53Q5H9E4 307 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 BORCS7Q96B45 105 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 CHRNA10Q9GZZ6 450 aa11.49□□□□□ -0.57
SCARB2-227ENST00000640957 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-227ENST00000640957 OR2T8A6NH00 312 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 CDIPTO14735 213 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 RAB29O14966 203 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 CAMPP49913 170 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 SAP25Q8TEE9 199 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 COL4A2P08572 1712 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 LRRC30A6NM36 301 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 AHRRA9YTQ3 701 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 CD1BP29016 333 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 KLF3P57682 345 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-227ENST00000640957 SELENOVP59797 346 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 BPIFB3P59826 476 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 AESQ08117 197 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 PRR27Q6MZM9 219 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 ZNF439Q8NDP4 499 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 HES7Q9BYE0 225 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
SCARB2-227ENST00000640957 CSMD1Q96PZ7 3565 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 LNP1A1A4G5 178 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 MYOD1P15172 320 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
SCARB2-227ENST00000640957 ZNF826PQ6ZT77 177 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 MRGPRDQ8TDS7 321 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-227ENST00000640957 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
SCARB2-227ENST00000640957 ATMQ13315 3056 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 SPTAN1Q13813 2472 aaKnown RBP11.47□□□□□ -0.57
SCARB2-227ENST00000640957 WNT9BO14905 357 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 SYNGR4O95473 234 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 CTXN2P0C2S0 81 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 FAM168AQ92567 244 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 LAMA5O15230 3695 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 MGAQ8IWI9 3026 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 OR2H2O95918 312 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 CA2P00918 260 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 CTRLP40313 264 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-227ENST00000640957 RPEL1Q2QD12 228 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 FAM216AQ8WUB2 273 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 PKDREJQ9NTG1 2253 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 IGLV3-12A0A075B6K2 115 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 PDE6DO43924 150 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms