RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 ZG16O60844 167 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 CER1O95813 267 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 TOMM40O96008 361 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 UBE2G2P60604 165 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
VCL-207ENST00000624354 PLGLB1Q02325 96 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 ZNF146Q15072 292 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 Q6ZN92 141 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 ZNF808Q8N4W9 903 aaPredicted RBP7.29□□□□□ -1.24
VCL-207ENST00000624354 NPCDR1Q9BY65 106 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 SAMD10Q9BYL1 202 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 TTTY12Q9BZ98 90 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 C12orf49Q9H741 205 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 ABI3Q9P2A4 366 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 TNRC6BQ9UPQ9 1833 aaKnown RBP7.29□□□□□ -1.24
VCL-207ENST00000624354 ABCA1O95477 2261 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 SPATA45Q537H7 98 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 WDR86Q86TI4 376 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 MDP1Q86V88 176 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 CORO2AQ92828 525 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 NINJ1Q92982 152 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 MED13Q9UHV7 2174 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 TMEM30CPA0ZSE6 113 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 PMS2P5A8MQ11 134 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 C11orf94C9JXX5 98 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 S1PR2O95136 353 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 ADMP35318 185 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 CDC34P49427 236 aaPredicted RBP7.28□□□□□ -1.24
VCL-207ENST00000624354 RPL30P62888 115 aaKnown RBP7.28□□□□□ -1.24
VCL-207ENST00000624354 TFF3Q07654 80 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 TBC1D28Q2M2D7 210 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 VHLLQ6RSH7 139 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 LINC01551Q86U37 167 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 OR1L1Q8NH94 360 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 ZDHHC11Q9H8X9 412 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 LOXL2Q9Y4K0 774 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 IGHV3-64DA0A0J9YX35 117 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 CIDEAO60543 219 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 RPS16P62249 146 aaKnown RBP7.28□□□□□ -1.24
VCL-207ENST00000624354 MRPL49Q13405 166 aaKnown RBP7.28□□□□□ -1.24
VCL-207ENST00000624354 OR1C1Q15619 314 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 C3AR1Q16581 482 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 UNQ5815/PRO19632Q6UWF5 114 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 H2BFWTQ7Z2G1 175 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 TMEM251Q8N6I4 163 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 GP6Q9HCN6 339 aa7.28□□□□□ -1.24
VCL-207ENST00000624354 ZFYVE26Q68DK2 2539 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 RAB29O14966 203 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 HAND1O96004 215 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 P0C879 139 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 S100A7P31151 101 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 KRTDAPP60985 99 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 Q6ZVH6 145 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 VASH2Q86V25 355 aa7.27□□□□□ -1.24
VCL-207ENST00000624354 BCL2L2Q92843 193 aaPredicted RBP7.27□□□□□ -1.24
VCL-207ENST00000624354 PLCE1Q9P212 2302 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 TRAV34A0A0B4J273 112 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 C17orf98A8MV24 154 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 C1QTNF9BB2RNN3 333 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 C12orf77C9JDV5 145 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 J3QW42 95 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 GALR2O43603 387 aaPredicted RBP7.27□□□□□ -1.25
VCL-207ENST00000624354 SERF1AO75920 110 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 CLDN14O95500 239 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 GRPP07492 148 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 CRISP2P16562 243 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 BAGE3Q86Y29 109 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 OR52L2PQ8NGH6 319 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 SVIPQ8NHG7 77 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 RNF2Q99496 336 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 BET1LQ9NYM9 111 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 SMG1Q96Q15 3661 aaKnown RBP7.27□□□□□ -1.25
VCL-207ENST00000624354 OOEPA6NGQ2 149 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 M0QZ24 198 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 PDE6DO43924 150 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 PSPNO60542 156 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 SP9P0CG40 484 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 MPLP40238 635 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 CEBPDP49716 269 aaPredicted RBP7.27□□□□□ -1.25
VCL-207ENST00000624354 HINT1P49773 126 aaPredicted RBP7.27□□□□□ -1.25
VCL-207ENST00000624354 RPL19P84098 196 aaKnown RBP7.27□□□□□ -1.25
VCL-207ENST00000624354 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 TCF23Q7RTU1 214 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 TCTEX1D1Q8N7M0 179 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 STARD4Q96DR4 205 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 RNF24Q9Y225 148 aa7.27□□□□□ -1.25
VCL-207ENST00000624354 IGHV2-70DA0A0C4DH43 119 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 F6UZH7 168 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 HBZP02008 142 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 DEFA4P12838 97 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 LINC00696Q6ZRV3 163 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 C1orf174Q8IYL3 243 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 SIGLECL1Q8N7X8 197 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 TAAR6Q96RI8 345 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms