RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 PRSS46E5RG02 174 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 AQP7O14520 342 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 FOXL1Q12952 345 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 VKORC1L1Q8N0U8 176 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 FAM216AQ8WUB2 273 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 TMEM18Q96B42 140 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 BTF3L4Q96K17 158 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 TXNDC17Q9BRA2 123 aa13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.18
PRKCSH-205ENST00000587327 M0R1X1 148 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 RBFOX2O43251 390 aaKnown RBP eCLIP13.95□□□□□ -0.181e-7■■■■■ 31.4
PRKCSH-205ENST00000587327 GFRA3O60609 400 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 YPEL1O60688 119 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 ARL14EPLP0DKL9 152 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 CNN1P51911 297 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 DEFB109BQ30KR1 87 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 YPEL2Q96QA6 119 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 MGST2Q99735 147 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 MS4A5Q9H3V2 200 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 CACNA1GO43497 2377 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 IGKV1D-17A0A075B6S4 117 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 IGLV1-44P01699 117 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 STAG3L2P0CL84 134 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 STAG3L3P0CL85 134 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 RELBQ01201 579 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 C9orf106Q8NAJ2 232 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 SFRP2Q96HF1 295 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 NOL4LQ96MY1 436 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 FAM234AQ9H0X4 552 aa13.95□□□□□ -0.18
PRKCSH-205ENST00000587327 IGHV2OR16-5A0A0B4J2B6 119 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 A0A0U1RQK1 487 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNF320A2RRD8 509 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNF705GA8MUZ8 300 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 CXorf1O96002 111 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNF134P52741 427 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 LOXL3P58215 753 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 ERVK-16P61578 105 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 MZT1Q08AG7 82 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 TCF15Q12870 199 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 RPL39P5Q59GN2 51 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 ABHD12Q8N2K0 398 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 PXMP4Q9Y6I8 212 aa13.94□□□□□ -0.18
PRKCSH-205ENST00000587327 TRBV20OR9-2A0A075B6H5 130 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 SRRM5B3KS81 715 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 CCKARP32238 428 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 MIC13Q5XKP0 118 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 OR2Z1Q8NG97 314 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 SDSLQ96GA7 329 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 DUSP13Q9UII6 198 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 TRAPPC1Q9Y5R8 145 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 HCFC1P51610 2035 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 TRAV3A0A0B4J244 114 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 IGHV1-18A0A0C4DH31 117 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 A0A1B0GV90 55 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 MGST3O14880 152 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 CEACAM4O75871 244 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 S1PR3Q99500 378 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 TMEM140Q9NV12 185 aa13.93□□□□□ -0.18
PRKCSH-205ENST00000587327 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 PLSCR4Q9NRQ2 329 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 CFAP47Q6ZTR5 3102 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 F2RL2O00254 374 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 IGHV3-13P01766 116 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 IGHV3-7P01780 117 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 MRPL41Q8IXM3 137 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 C1orf174Q8IYL3 243 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 SARAFQ96BY9 339 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 C1orf159Q96HA4 380 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 ELOVL5Q9NYP7 299 aa13.92□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNF292O60281 2723 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 SSTP61278 116 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 LBHQ53QV2 105 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 PPP1R35Q8TAP8 253 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 DDB2Q92466 427 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 TMEM204Q9BSN7 226 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 TCF19Q9Y242 345 aa13.91□□□□□ -0.18
PRKCSH-205ENST00000587327 TRGV8A0A0C4DH27 118 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 CFHR2P36980 270 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 KIR2DS2P43631 304 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 ZNRF1Q8ND25 227 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 PRSS33Q8NF86 280 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 NDUFAF3Q9BU61 184 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 CHODLQ9H9P2 273 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 SCO2A0A1W2PP80 73 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 SLC31A2O15432 143 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 C1orf229Q6ZS94 237 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
PRKCSH-205ENST00000587327 OCC1Q8TAD7 63 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms