RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ANKRD13BQ86YJ7 626 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 PUSL1Q8N0Z8 303 aaKnown RBP12.89□□□□□ -0.35
USB1-211ENST00000565662 CADM3Q8N126 398 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 OR5H2Q8NGV7 314 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
USB1-211ENST00000565662 PLEKHA2Q9HB19 425 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 EHFQ9NZC4 300 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 TRBV9A0A0B4J1U6 114 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 J3QRK9 145 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 NAT1P18440 290 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 RORCP51449 518 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 ERVK-16P61578 105 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 IDO2Q6ZQW0 420 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 OR2K2Q8NGT1 345 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 FUNDC2Q9BWH2 189 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 FAM212BQ9NTI7 297 aaPredicted RBP12.88□□□□□ -0.35
USB1-211ENST00000565662 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 SORL1Q92673 2214 aa12.88□□□□□ -0.35
USB1-211ENST00000565662 RPL30P62888 115 aaKnown RBP12.87□□□□□ -0.35
USB1-211ENST00000565662 ATP5G2Q06055 141 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 OR2B11Q5JQS5 317 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 DHRS11Q6UWP2 260 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 MOB3AQ96BX8 217 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 PRR25Q96S07 402 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 SLC2A9Q9NRM0 540 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 THYN1Q9P016 225 aa12.87□□□□□ -0.35
USB1-211ENST00000565662 TNCP24821 2201 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 ZNF735P0CB33 412 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 GP9P14770 177 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 RCVRNP35243 200 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 FXYD4P59646 89 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 LSM3P62310 102 aaKnown RBP12.86□□□□□ -0.35
USB1-211ENST00000565662 RHOGP84095 191 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
USB1-211ENST00000565662 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
USB1-211ENST00000565662 MRGPRG-AS1Q2M3A8 158 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 TMEM17Q86X19 198 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
USB1-211ENST00000565662 GABARAPO95166 117 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 IGLV1-51P01701 117 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 HLA-GP17693 338 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 TSC22D3Q99576 134 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 RSRP1Q9BUV0 290 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 COMMD5Q9GZQ3 224 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 HRASLSQ9HDD0 168 aa12.85□□□□□ -0.35
USB1-211ENST00000565662 CRYGCP07315 174 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 TBPP20226 339 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 KLK9Q2XQG4 91 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 ZNF818PQ6ZRF7 136 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 LAX1Q8IWV1 398 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 Q8N402 240 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 GPX8Q8TED1 209 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 FYTTD1Q96QD9 318 aaKnown RBP12.84□□□□□ -0.35
USB1-211ENST00000565662 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
USB1-211ENST00000565662 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
USB1-211ENST00000565662 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 COMMD3Q9UBI1 195 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 RABL2AQ9UBK7 228 aaPredicted RBP12.84□□□□□ -0.35
USB1-211ENST00000565662 KLK9Q9UKQ9 250 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 RABL2BQ9UNT1 228 aa12.84□□□□□ -0.35
USB1-211ENST00000565662 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
USB1-211ENST00000565662 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 TEX22C9J3V5 150 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 GPR31O00270 319 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 TNFSF12O43508 249 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 DEFA4P12838 97 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 SPNP16150 400 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 F2RP25116 425 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 TSPAN5P62079 268 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
USB1-211ENST00000565662 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 GGCTO75223 188 aaKnown RBP12.82□□□□□ -0.36
USB1-211ENST00000565662 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
USB1-211ENST00000565662 PSMB6P28072 239 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 VBP1P61758 197 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 NCS1P62166 190 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 VKORC1L1Q8N0U8 176 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 OR51H1Q8NH63 302 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 ATP6V0BQ99437 205 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 BCL7BQ9BQE9 202 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 U3KQK5 164 aa12.82□□□□□ -0.36
USB1-211ENST00000565662 MEIS3P1A6NDR6 274 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms