RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 H0YJW9 148 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 I3L521 148 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CCRL2O00421 344 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ITGB1BP1O14713 200 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ARPC1BO15143 372 aaKnown RBP3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ATP6V0E1O15342 81 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 YPEL1O60688 119 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF780AO75290 641 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-214ENST00000550893 IGHG4P01861 327 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 HLA-DRB1P01911 266 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 IGKV1-16P04430 117 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 IGF1P05019 195 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CLEC3BP05452 202 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 FCGR3AP08637 254 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 IGKV1-13P0DP09 117 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 GNB3P16520 340 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 TMEM11P17152 192 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CALRP27797 417 aaKnown RBP3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CD1BP29016 333 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 RAB7AP51149 207 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CD81P60033 236 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 IGSF11Q5DX21 431 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 HES5Q5TA89 166 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF773Q6PK81 442 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 FAM131AQ6UXB0 335 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF554Q86TJ5 538 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CCDC190Q86UF4 302 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 MS4A15Q8N5U1 240 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 NPBQ8NG41 125 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 OR5H6Q8NGV6 325 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 UFD1Q92890 307 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 PTX4Q96A99 478 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 RPEQ96AT9 228 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 FAM3DQ96BQ1 224 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ABHD14BQ96IU4 210 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 YPEL2Q96QA6 119 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 OR51E2Q9H255 320 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCAF11-214ENST00000550893 TXNL4BQ9NX01 149 aaKnown RBP3.71□□□□□ -1.82
SCAF11-214ENST00000550893 RAB26Q9ULW5 256 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 ERGIC3Q9Y282 383 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 DNAH2Q9P225 4427 aa3.71□□□□□ -1.82
SCAF11-214ENST00000550893 FUOMA2VDF0 154 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 SRRM4A7MD48 611 aaKnown RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 CA11O75493 328 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 UBBP0CG47 229 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 PTHLHP12272 177 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 GZMHP20718 246 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 MAPK3P27361 379 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 BLVRBP30043 206 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 FGF9P31371 208 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ACTBP60709 375 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 DEFA5Q01523 94 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 PJVKQ0ZLH3 352 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 C2orf76Q3KRA6 126 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 C22orf42Q6IC83 251 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 Q6ZS49 121 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 MINDY2Q8NBR6 621 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 KCNG3Q8TAE7 436 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 LGALS14Q8TCE9 139 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 CASTOR1Q8WTX7 329 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 YIPF6Q96EC8 236 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 CPNE2Q96FN4 548 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 CENPOQ9BU64 300 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ALX4Q9H161 411 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 SPACA1Q9HBV2 294 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 OR2S2Q9NQN1 319 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ABCB10Q9NRK6 738 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 PTTG2Q9NZH5 202 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 GHRLQ9UBU3 117 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 GLS2Q9UI32 602 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF230Q9UIE0 474 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 PITPNC1Q9UKF7 332 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 ANAPC10Q9UM13 185 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 AMMECR1Q9Y4X0 333 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-214ENST00000550893 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 HECTD4Q9Y4D8 3996 aa3.7□□□□□ -1.82
SCAF11-214ENST00000550893 TRBV6-7A0A0A0MS04 114 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 PSMB11A5LHX3 300 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 MCRIP1C9JLW8 97 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 E7EUB6 86 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 TOR1AO14656 332 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 MAGEB3O15480 346 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 MOSP00540 346 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GSTT2P0CG29 244 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GSTT2BP0CG30 244 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 HSMCR30P0CW71 290 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GADD45AP24522 165 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 BRS3P32247 399 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 CEACAM3P40198 252 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 LUMP51884 338 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 PRRX1P54821 245 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 RPL30P62888 115 aaKnown RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GPR176Q14439 515 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms