RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ABHD5Q8WTS1 349 aa19.27■□□□□ 0.68
FOXA1-202ENST00000545425 FRZBQ92765 325 aa19.27■□□□□ 0.68
FOXA1-202ENST00000545425 FNDC10F2Z333 226 aa19.26■□□□□ 0.67
FOXA1-202ENST00000545425 FCGR3BO75015 233 aa19.26■□□□□ 0.67
FOXA1-202ENST00000545425 TYMSP04818 313 aa19.26■□□□□ 0.67
FOXA1-202ENST00000545425 VDAC2P45880 294 aaPredicted RBP19.26■□□□□ 0.67
FOXA1-202ENST00000545425 COA6Q5JTJ3 125 aaKnown RBP19.26■□□□□ 0.67
FOXA1-202ENST00000545425 LURAP1LQ8IV03 231 aa19.26■□□□□ 0.67
FOXA1-202ENST00000545425 ZADH2Q8N4Q0 377 aa19.26■□□□□ 0.67
FOXA1-202ENST00000545425 IGHV3-43A0A0B4J1X8 118 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 M0R1X1 148 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 OR9G9P0C7N8 305 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 IGHV3-43DP0DP04 118 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 GALR1P47211 349 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 ATP5IP56385 69 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-202ENST00000545425 LOXL3P58215 753 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 LCN2P80188 198 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 EDDM3AQ14507 147 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 KCNIP4Q6PIL6 250 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 SPNS3Q6ZMD2 512 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 RFESDQ8TAC1 157 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 RPUSD4Q96CM3 377 aaKnown RBP19.25■□□□□ 0.67
FOXA1-202ENST00000545425 ACY3Q96HD9 319 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 MEGF10Q96KG7 1140 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 TMEM204Q9BSN7 226 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 KIAA2026Q5HYC2 2103 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 A0A1W2PPV4 95 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 PPP5D1E7EU14 171 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 LHBP01229 141 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 THBS3P49746 956 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 KLF3P57682 345 aaPredicted RBP19.25■□□□□ 0.67
FOXA1-202ENST00000545425 IGFL3Q6UXB1 125 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 FAM222BQ8WU58 562 aa19.25■□□□□ 0.67
FOXA1-202ENST00000545425 C11orf94C9JXX5 98 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 GGCTO75223 188 aaKnown RBP19.24■□□□□ 0.67
FOXA1-202ENST00000545425 CRYAAP02489 173 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 CGB3P0DN86 165 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 CGB7P0DN87 165 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 Q8N7P7 452 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 PFDN5Q99471 154 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 OPN3Q9H1Y3 402 aaPredicted RBP19.24■□□□□ 0.67
FOXA1-202ENST00000545425 IFI27L2Q9H2X8 130 aa19.24■□□□□ 0.67
FOXA1-202ENST00000545425 IGLV3-9A0A075B6K5 115 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 PAGE4O60829 102 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 IFNA10P01566 189 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 GYPAP02724 150 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 EGR1P18146 543 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 RELBQ01201 579 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 PYY3Q5JQD4 70 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 TPRX1Q8N7U7 411 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 DDB2Q92466 427 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 SFXN3Q9BWM7 321 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 FAM234AQ9H0X4 552 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 HEYLQ9NQ87 328 aaPredicted RBP19.23■□□□□ 0.67
FOXA1-202ENST00000545425 CALYQ9NYX4 217 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 DUSP13Q9UII6 198 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 FZR1Q9UM11 496 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 PLA2G2AP14555 144 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 SELENOVP59797 346 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 POU2AF1Q16633 256 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 TMEM183AQ8IXX5 376 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 CISD2Q8N5K1 135 aaKnown RBP19.23■□□□□ 0.67
FOXA1-202ENST00000545425 CORO2AQ92828 525 aa19.23■□□□□ 0.67
FOXA1-202ENST00000545425 CHD3Q12873 2000 aaKnown RBP19.22■□□□□ 0.67
FOXA1-202ENST00000545425 ZNF729A6NN14 1252 aaPredicted RBP19.22■□□□□ 0.67
FOXA1-202ENST00000545425 DEFB108AA8MXU0 73 aa19.22■□□□□ 0.67
FOXA1-202ENST00000545425 GATCO43716 136 aaKnown RBP19.22■□□□□ 0.67
FOXA1-202ENST00000545425 PROP1O75360 226 aa19.22■□□□□ 0.67
FOXA1-202ENST00000545425 FAM53AQ6NSI3 398 aaPredicted RBP19.22■□□□□ 0.67
FOXA1-202ENST00000545425 SDSLQ96GA7 329 aa19.22■□□□□ 0.67
FOXA1-202ENST00000545425 FOXA2Q9Y261 457 aaPredicted RBP19.22■□□□□ 0.67
FOXA1-202ENST00000545425 PRSS46E5RG02 174 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 CXorf1O96002 111 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 RAB31Q13636 194 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 OR10D4PQ8NGN7 298 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 OR4X1Q8NH49 305 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 LINC00574Q9H8X3 128 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 NPVFQ9HCQ7 196 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 GFOD1Q9NXC2 390 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 TP53TG5Q9Y2B4 290 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 BOD1L1Q8NFC6 3051 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 SOD3P08294 240 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 HIST1H1BP16401 226 aaKnown RBP19.21■□□□□ 0.67
FOXA1-202ENST00000545425 HNF4GQ14541 408 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 SSX2Q16385 188 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 OR2T10Q8NGZ9 312 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 RNASEH2CQ8TDP1 164 aaKnown RBP19.21■□□□□ 0.67
FOXA1-202ENST00000545425 OR2V2Q96R30 315 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 TMEM140Q9NV12 185 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 ARL2-SNX15V9GYD0 113 aa19.21■□□□□ 0.67
FOXA1-202ENST00000545425 C15orf61A6NNL5 157 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 MT-CO2P00403 227 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 TIMP3P35625 211 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 TLE1Q04724 770 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 TREML4Q6UXN2 200 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 TCF19Q9Y242 345 aa19.2■□□□□ 0.66
FOXA1-202ENST00000545425 KBTBD11-OT1A0A1B0GTJ5 212 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 J3QKU1 62 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 STAG3L2P0CL84 134 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 STAG3L3P0CL85 134 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms