RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ADAT1Q9BUB4 502 aaKnown RBP4.82□□□□□ -1.64
CPSF7-219ENST00000539952 NAA60Q9H7X0 242 aa4.82□□□□□ -1.64
CPSF7-219ENST00000539952 GPR84Q9NQS5 396 aa4.82□□□□□ -1.64
CPSF7-219ENST00000539952 SERTAD4Q9NUC0 356 aa4.82□□□□□ -1.64
CPSF7-219ENST00000539952 GAR1Q9NY12 217 aaKnown RBP4.82□□□□□ -1.64
CPSF7-219ENST00000539952 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
CPSF7-219ENST00000539952 TENM3Q9P273 2699 aa4.82□□□□□ -1.64
CPSF7-219ENST00000539952 A0A0A6YYD4 124 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PRD5 423 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PRF3 423 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PRM7 423 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 WI2-2373I1.2A0A1W2PRP0 233 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A18PA6NE21 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A16PA6NEW6 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 RBFOX3A6NFN3 312 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A8PA6NJQ4 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A7PA6NKC0 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CD300LBA8K4G0 201 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF850A8MQ14 1090 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A22PA8MWA6 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A12PA8MX19 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A5PA8MXJ8 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A23PA8MXZ1 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF732B4DXR9 585 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 F5H5K5 113 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 F2RL2O00254 374 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 SIGLEC5O15389 551 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 GRPP07492 148 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CTXN2P0C2S0 81 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 OR8U9P0C7N5 309 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A15PP0C7V4 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A14PP0C7W9 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 OR5H8P0DN80 308 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 LMO1P25800 156 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 S100GP29377 79 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 TAGLN2P37802 199 aaKnown RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 OR3A4PP47883 348 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF121P58317 390 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF616Q08AN1 781 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 RSPO1Q2MKA7 263 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 SLC22A6Q4U2R8 563 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 KHDC3LQ587J8 217 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 HEPN1Q6WQI6 88 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ASCL4Q6XD76 172 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 MRPL21Q7Z2W9 205 aaKnown RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 SLC35E3Q7Z769 313 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 TMEM104Q8NE00 496 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 OR8U1Q8NH10 309 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CD300LFQ8TDQ1 290 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 MAFIPQ8WZ33 124 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 DPF1Q92782 380 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 BTF3L4Q96K17 158 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 PFDN5Q99471 154 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 P2RX4Q99571 388 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CCL13Q99616 98 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 MCRIP2Q9BUT9 160 aaKnown RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 PAPOLGQ9BWT3 736 aaKnown RBP4.81□□□□□ -1.64
CPSF7-219ENST00000539952 PRSS22Q9GZN4 317 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CHST5Q9GZS9 411 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 CTDSP1Q9GZU7 261 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 BANF2Q9H503 90 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF286AQ9HBT8 521 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 IL36GQ9NZH8 169 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 KIAA1456Q9P272 454 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 PITPNC1Q9UKF7 332 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 LHFPL6Q9Y693 200 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 U3KQK5 164 aa4.81□□□□□ -1.64
CPSF7-219ENST00000539952 RYR1P21817 5038 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 TRBV23-1A0A0A0MS06 115 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 A6NLC8 198 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 LINC00587B1AMM8 73 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 SDCBPO00560 298 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FCN3O75636 299 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 DFFBO76075 338 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 DIRAS3O95661 229 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 PF4V1P10720 104 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 NQO2P16083 231 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 RPS10P46783 165 aaKnown RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FUT6P51993 359 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 LGALS4P56470 323 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 PIGPP57054 158 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 KRTAP10-11P60412 298 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 RAB4BP61018 213 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 HERV-K104P61576 105 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 RND3P61587 244 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 VAMP2P63027 116 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 IL24Q13007 206 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 PMS2P11Q13670 270 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 KIAA0141Q14154 515 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 KRTAP27-1Q3LI81 207 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FAM209BQ5JX69 171 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms