RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 UHRF1BP1Q6BDS2 1440 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 DBIP07108 87 aaKnown RBP2.77□□□□□ -1.97
SKP1-209ENST00000522552 ZNF806P0C7X5 589 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 CD28P10747 220 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 S100PP25815 95 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 NUDT2P50583 147 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 PIGPP57054 158 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 FGF12P61328 243 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 HBA1P69905 142 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 HOXC5Q00444 222 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 ZNF678Q5SXM1 525 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 FAAP20Q6NZ36 180 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 NTM-AS1Q6ZSK4 140 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 GPHB5Q86YW7 130 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 NUP35Q8NFH5 326 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 CARD19Q96LW7 228 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 SHANK2-AS3Q9BTD1 123 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 PLA2G12AQ9BZM1 189 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 NLRC5Q86WI3 1866 aa2.77□□□□□ -1.97
SKP1-209ENST00000522552 IGHV3OR15-7A0A075B7D8 119 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IGHV3-64DA0A0J9YX35 117 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 LOC102725191A0A1B0GVB3 256 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 TMEM269A0A1B0GVZ9 245 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 DPRXA6NFQ7 191 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 OR5H14A6NHG9 310 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 PLA2G10O15496 165 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 FAM107AO95990 144 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 CD200P41217 278 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IL17AQ16552 155 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 SP6Q3SY56 376 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IDO2Q6ZQW0 420 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 PACRGLQ8N7B6 248 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
SKP1-209ENST00000522552 FER1L6-AS1Q8NA97 138 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 OR5A1Q8NGJ0 315 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 OR10D4PQ8NGN7 298 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 CIRBP-AS1Q8TBR5 109 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 CANT1Q8WVQ1 401 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 ACOT12Q8WYK0 555 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 PEBP4Q96S96 227 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 B9D2Q9BPU9 175 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 POPDC3Q9HBV1 291 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 TRAPPC2LQ9UL33 140 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 U3KQ87 197 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 PLXND1Q9Y4D7 1925 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IGSF9BQ9UPX0 1349 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 CABIN1Q9Y6J0 2220 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 SPEF2Q9C093 1822 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 KIF13BQ9NQT8 1826 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 DICER1Q9UPY3 1922 aaKnown RBP2.76□□□□□ -1.97
SKP1-209ENST00000522552 ZNF318Q5VUA4 2279 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IGKV2D-30A0A075B6S6 120 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 TRAV9-1A0A075B6T8 112 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 IGHV3-43A0A0B4J1X8 118 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 DUXBA0A1W2PPF3 345 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 A6NDX4 124 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 J3QRK9 145 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 HLA-DQB1P01920 261 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 CD7P09564 240 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 ZNF705DP0CH99 300 aaPredicted RBP2.76□□□□□ -1.97
SKP1-209ENST00000522552 NPY1RP25929 384 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 EVX1P49640 407 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 RPS11P62280 158 aaKnown RBP eCLIP2.76□□□□□ -1.97
SKP1-209ENST00000522552 KRTAP24-1Q3LI83 254 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 HRCT1Q6UXD1 115 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 SCXQ7RTU7 201 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 Q8N9W7 124 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 OR10G2Q8NGC3 310 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 OR5W2Q8NH69 310 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 C1orf54Q8WWF1 131 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 ITLN2Q8WWU7 325 aaPredicted RBP2.76□□□□□ -1.97
SKP1-209ENST00000522552 RNASE6Q93091 150 aaKnown RBP2.76□□□□□ -1.97
SKP1-209ENST00000522552 CMBLQ96DG6 245 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 C12orf57Q99622 126 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 SPIN2AQ99865 258 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 SPIN2BQ9BPZ2 258 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 TM2D3Q9BRN9 247 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 MED31Q9Y3C7 131 aa2.76□□□□□ -1.97
SKP1-209ENST00000522552 NUP214P35658 2090 aaPredicted RBP2.75□□□□□ -1.97
SKP1-209ENST00000522552 CEP170Q5SW79 1584 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 KIF26BQ2KJY2 2108 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 BCL9O00512 1426 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 DSCAMO60469 2012 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 A0A096LPI6 279 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 IGKV1D-43A0A0B4J1Z2 117 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 A0A0J9YWU9 116 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 C9JCJ5 164 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 C11orf94C9JXX5 98 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 HLA-DQA1P01909 254 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 ZNF32P17041 273 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 SRIP30626 198 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 LPAR6P43657 344 aa2.75□□□□□ -1.97
SKP1-209ENST00000522552 CRIP2P52943 208 aaPredicted RBP2.75□□□□□ -1.97
SKP1-209ENST00000522552 RRAS2P62070 204 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms