RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 E7EQL1 145 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 GNRH2O43555 120 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 C1QAP02745 245 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 SRP19P09132 144 aaKnown RBP1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 CCL5P13501 91 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 CPMP14384 443 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 KCNE1P15382 129 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 GNA12Q03113 381 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 GLT8D1Q68CQ7 371 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 DYNAPQ8N1N2 210 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR13C8Q8NGS7 320 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR2T4Q8NH00 348 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF675Q8TD23 568 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 BORCS7Q96B45 105 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 PPP1R2P1Q96PQ5 205 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 FAM96AQ9H5X1 160 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 CXorf21Q9HAI6 301 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 MINOS1-NBL1R4GNA1 71 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 NUP155O75694 1391 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 ATG2BQ96BY7 2078 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 NUP160Q12769 1436 aa1.57□□□□□ -2.16
RNU6-840P-201ENST00000517275 A0A0J9YX75 114 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 KNCNA6PVL3 124 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 PSMD12O00232 456 aaPredicted RBP1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 PLXNB1O43157 2135 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 NSA2O95478 260 aaKnown RBP1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 CCL20P78556 96 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 GUK1Q16774 197 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 LPCAT3Q6P1A2 487 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 MSRB3Q8IXL7 192 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF283Q8N7M2 679 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR51D1Q8NGF3 324 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 NIPSNAP1Q9BPW8 284 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 TUBA4BQ9H853 241 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 GLTPQ9NZD2 209 aa1.56□□□□□ -2.16
RNU6-840P-201ENST00000517275 TRGV5A0A0B4J1U4 118 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR2B3O76000 313 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 HLA-DRB1P01911 266 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 IGKV4-1P06312 121 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 CST2P09228 141 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 SNRPD2P62316 118 aaKnown RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 RPL30P62888 115 aaKnown RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 MEF2BQ02080 365 aaPredicted RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 FOXF1Q12946 379 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 SPA17Q15506 151 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 PABPC1L2AQ5JQF8 200 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 C9orf64Q5T6V5 341 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 TMEM42Q69YG0 159 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 SSX8Q7RTT4 187 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR6V1Q8N148 313 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 C12orf45Q8N5I9 185 aaPredicted RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF676Q8N7Q3 588 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 DNAJC30Q96LL9 226 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 TSPAN32Q96QS1 320 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 PRTFDC1Q9NRG1 225 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 MMACHCQ9Y4U1 282 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF638Q14966 1978 aaKnown RBP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 MTUS2Q5JR59 1369 aa1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 WRNQ14191 1432 aaPredicted RBP eCLIP1.55□□□□□ -2.16
RNU6-840P-201ENST00000517275 A0A0J9YW62 118 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 MDFIC2A0A1B0GVS7 189 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR4C46A6NHA9 309 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 C11orf86A6NJI1 115 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 LY6LH3BQJ8 138 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 NOS1APO75052 506 aaPredicted RBP1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 CNIH1O95406 144 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 GZMHP20718 246 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 S100A5P33763 92 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 PACRGLQ8N7B6 248 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZCCHC13Q8WW36 166 aaKnown RBP1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 TRIM4Q9C037 500 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 DOK5Q9P104 306 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 PRELID3BQ9Y3B1 194 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 SAMHD1Q9Y3Z3 626 aaKnown RBP1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 SLIT2O94813 1529 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 TRPM6Q9BX84 2022 aa1.54□□□□□ -2.16
RNU6-840P-201ENST00000517275 TRBV20OR9-2A0A075B6H5 130 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 TRAV26-2A0A0B4J265 109 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 A0A0J9YY10 115 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 A0A1B0GX78 115 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 C2orf74A8MZ97 194 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 FAAHO00519 579 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF189O75820 626 aaPredicted RBP1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 OR7C1O76099 320 aaPredicted RBP1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 PRM2P04554 102 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 ZNF705DP0CH99 300 aaPredicted RBP1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 RPL5P46777 297 aaKnown RBP1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 CSN1S1P47710 185 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 AP1S1P61966 158 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 GRIN2BQ13224 1484 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 CDK10Q15131 360 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 TMED2Q15363 201 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 SS18Q15532 418 aa1.53□□□□□ -2.16
RNU6-840P-201ENST00000517275 GRK1Q15835 563 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms