RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 HECW1Q76N89 1606 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ARAP1Q96P48 1450 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 TSPOAP1O95153 1857 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 IGLV2-18A0A075B6J9 118 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 TRAV40A0A0B4J280 105 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 A0A0J9YY10 115 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 A0A1B0GX78 115 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 C7orf66A4D0T2 115 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 COLCA2A8K830 154 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 GSTZ1O43708 216 aaPredicted RBP2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 CCNKO75909 580 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 PIAS1O75925 651 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 GYPCP04921 128 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 CSN2P05814 226 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 C8GP07360 202 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 TFPTP0C1Z6 253 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 CD28P10747 220 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 OPRM1P35372 400 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 BSPH1Q075Z2 132 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 TNFAIP8L3Q5GJ75 292 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 Q6ZS49 121 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 CLVS1Q8IUQ0 354 aaPredicted RBP2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 SLC22A24Q8N4F4 322 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 OR8J3Q8NGG0 315 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 OR13C8Q8NGS7 320 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 CD200R1Q8TD46 325 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 LMX1AQ8TE12 382 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 RTN4IP1Q8WWV3 396 aaPredicted RBP2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 LZICQ8WZA0 190 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 GPR82Q96P67 336 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 LYSMD1Q96S90 227 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 TSC22D3Q99576 134 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 PBDC1Q9BVG4 233 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 RASL12Q9NYN1 266 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 C21orf62Q9NYP8 219 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 ASB4Q9Y574 426 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 NID2Q14112 1375 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 PLA2R1Q13018 1463 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 NAV1Q8NEY1 1877 aa2.18□□□□□ -2.06
SMARCA1-204ENST00000478420 ITGB4P16144 1822 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 BAZ2AQ9UIF9 1905 aaKnown RBP2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 A0A087WX48 190 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 TRAV4A0A0B4J268 109 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 TMEM223A0PJW6 202 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 LINC00862A6NCI5 91 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 IZUMO1RA6ND01 250 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 OR5H14A6NHG9 310 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 SLC17A3O00476 420 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 PIRO00625 290 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CGB3P0DN86 165 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CGB7P0DN87 165 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 GPX2P18283 190 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 AKR1C3P42330 323 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CXCL12P48061 93 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 ATP5G3P48201 142 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 PSMD8P48556 350 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 NUDT2P50583 147 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF140P52738 457 aaPredicted RBP2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 FGF12P61328 243 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 GNA12Q03113 381 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CAV1Q03135 178 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 BAMBIQ13145 260 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 RHEBQ15382 184 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 LTC4SQ16873 150 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 SMIM21Q3B7S5 101 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF880Q6PDB4 577 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 HMGN2P46Q86SG4 172 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 WDR86Q86TI4 376 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 GPHB5Q86YW7 130 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 GPR119Q8TDV5 335 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 RAB2BQ8WUD1 216 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 RNASE6Q93091 150 aaKnown RBP2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CMBLQ96DG6 245 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 NARS2Q96I59 477 aaKnown RBP2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 TRIB3Q96RU7 358 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 NMNAT3Q96T66 252 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 COMMD5Q9GZQ3 224 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CCDC90BQ9GZT6 254 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 CHST6Q9GZX3 395 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 C11orf68Q9H3H3 251 aaKnown RBP2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 GPR84Q9NQS5 396 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 FBXL12Q9NXK8 326 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF586Q9NXT0 402 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 NUBP2Q9Y5Y2 271 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 MYO5BQ9ULV0 1848 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 SSH2Q76I76 1423 aa2.17□□□□□ -2.06
SMARCA1-204ENST00000478420 KMT2EQ8IZD2 1858 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 CEP170Q5SW79 1584 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 ABCC12Q96J65 1359 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 IGHV3OR15-7A0A075B7D8 119 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 RFPL4AA6NLU0 287 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 CLDN25C9JDP6 229 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 E7EQ34 232 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 RFPL4AL1F8VTS6 287 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 NDUFC2O95298 119 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 HLA-DQB1P01920 261 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 CD7P09564 240 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 OR5AC1P0C628 307 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms