RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 OOSP1A8MZH6 123 aa23.21■■□□□ 1.31
VEGFA-211ENST00000476772 GATA3P23771 443 aa23.21■■□□□ 1.31
VEGFA-211ENST00000476772 AJUBAQ96IF1 538 aa23.21■■□□□ 1.31
VEGFA-211ENST00000476772 CSMD1Q96PZ7 3565 aa23.21■■□□□ 1.31
VEGFA-211ENST00000476772 IGHV3OR16-10A0A075B7F0 116 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 C15orf61A6NNL5 157 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 IGHV4-31P0DP07 118 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 IAPPP10997 89 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 RPL12P30050 165 aaKnown RBP23.2■■□□□ 1.3
VEGFA-211ENST00000476772 PAX9P55771 341 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 UBE2KP61086 200 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 HABP2Q14520 560 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-211ENST00000476772 TMEM249Q2WGJ8 235 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 CCDC144NLQ6NUI1 221 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 PIP4P2Q8N4L2 257 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 WFDC11Q8NEX6 87 aa23.2■■□□□ 1.3
VEGFA-211ENST00000476772 UPK2O00526 184 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 VENTXO95231 258 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 RAB40CQ96S21 281 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.19■■□□□ 1.39e-9■■■□□ 14.6
VEGFA-211ENST00000476772 UNC79Q9P2D8 2635 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 IGHV1-69DA0A0B4J2H0 117 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 IGHV1-69P01742 117 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 C4BPBP20851 252 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 CD1BP29016 333 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 IFITM2Q01629 132 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 SPINK9Q5DT21 86 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 RUSC1-AS1Q66K80 236 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 MALSU1Q96EH3 234 aa23.19■■□□□ 1.3
VEGFA-211ENST00000476772 MAP1AP78559 2803 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-211ENST00000476772 MED6O75586 246 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 KBTBD11O94819 623 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 TGFAP01135 160 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 LGALS7P47929 136 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 CAV2P51636 162 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 ZNF429Q86V71 674 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 OR2C3Q8N628 320 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 ZDHHC16Q969W1 377 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 ZC4H2Q9NQZ6 224 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 TMEM14BQ9NUH8 114 aa23.18■■□□□ 1.3
VEGFA-211ENST00000476772 FOXA2Q9Y261 457 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-211ENST00000476772 FAM24AA6NFZ4 105 aa23.17■■□□□ 1.3
VEGFA-211ENST00000476772 IFNA17P01571 189 aa23.17■■□□□ 1.3
VEGFA-211ENST00000476772 CNTFRP26992 372 aa23.17■■□□□ 1.3
VEGFA-211ENST00000476772 LYRM2Q9NU23 88 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-211ENST00000476772 TET2Q6N021 2002 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-211ENST00000476772 SLC25A17O43808 307 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 GPR137BO60478 399 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 AVPP01185 164 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 IGHV4-38-2P0DP08 117 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 VMA21Q3ZAQ7 101 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 VSTM2AQ8TAG5 236 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 FOXC2Q99958 501 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 PRNDQ9UKY0 176 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 PRRC2AP48634 2157 aaKnown RBP23.16■■□□□ 1.3
VEGFA-211ENST00000476772 PDZD2O15018 2839 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 H3BP45 60 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 IGKV1D-33P01593 117 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 IGKV1-33P01594 117 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 MYOD1P15172 320 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 CD24P25063 80 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 GPR157Q5UAW9 335 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 OR52E5Q8NH55 327 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 GON7Q9BXV9 100 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 NUP50Q9UKX7 468 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 WSB1Q9Y6I7 421 aa23.16■■□□□ 1.3
VEGFA-211ENST00000476772 SVEP1Q4LDE5 3571 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 KANTRA0A1W2PQU2 76 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 IGSF23A1L1A6 192 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 CEBPZOSA8MTT3 80 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 BCL2L11O43521 198 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 SPCS3P61009 180 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 RPL23AP62750 156 aaKnown RBP23.15■■□□□ 1.3
VEGFA-211ENST00000476772 CLEC9AQ6UXN8 241 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 BRD3OSQ6XYD6 125 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 TMEM167AQ8TBQ9 72 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 DTD1Q8TEA8 209 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 SMIM8Q96KF7 97 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 TPSG1Q9NRR2 321 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 PSENENQ9NZ42 101 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 OR51B2Q9Y5P1 312 aa23.15■■□□□ 1.3
VEGFA-211ENST00000476772 PDLIM3Q53GG5 364 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-211ENST00000476772 OR4A5Q8NH83 315 aa23.14■■□□□ 1.29
VEGFA-211ENST00000476772 TSNAXQ99598 290 aaKnown RBP23.14■■□□□ 1.29
VEGFA-211ENST00000476772 TCF19Q9Y242 345 aa23.14■■□□□ 1.29
VEGFA-211ENST00000476772 SNRNP70P08621 437 aaKnown RBP23.13■■□□□ 1.29
VEGFA-211ENST00000476772 EWSR1Q01844 656 aaKnown RBP eCLIP23.13■■□□□ 1.294e-7■■■□□ 19.2
VEGFA-211ENST00000476772 PSG5Q15238 335 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 FBLN7Q53RD9 439 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 TMEM252Q8N6L7 170 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 BSCL2Q96G97 398 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-211ENST00000476772 RNF5Q99942 180 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 ARPC5LQ9BPX5 153 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 SLA2Q9H6Q3 261 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 HECTD1Q9ULT8 2610 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 J3QLI3 93 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 TAS2R30P59541 319 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 HNF4GQ14541 408 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 CACFD1Q9UGQ2 172 aa23.13■■□□□ 1.29
VEGFA-211ENST00000476772 MOSP00540 346 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms