RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 DHHO43323 396 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 PRSS12P56730 875 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 PLP1P60201 277 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 GABRA6Q16445 453 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
HDAC1-206ENST00000476391 WDR74Q6RFH5 385 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-206ENST00000476391 PLSCR4Q9NRQ2 329 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 ZNF835Q9Y2P0 537 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 DNAH14Q0VDD8 3507 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 A0A087X0K7 114 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 C22orf46C9J442 243 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 RRHO14718 337 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 SYNGR3O43761 229 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 BCL3P20749 454 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 FAM27BQ5VT28 67 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 KIR3DL3Q8N743 410 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 OR2T6Q8NHC8 308 aa11.55□□□□□ -0.56
HDAC1-206ENST00000476391 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-206ENST00000476391 M0R296 226 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 ZG16O60844 167 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 GCHFRP30047 84 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 C9orf135Q5VTT2 229 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 OR2K2Q8NGT1 345 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 NPFFR1Q9GZQ6 430 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
HDAC1-206ENST00000476391 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 PILRBQ9UKJ0 227 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 HELTA6NFD8 242 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 H3BMH7 237 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 HSPB6O14558 160 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 P0C879 139 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 GPM6AP51674 278 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 TCL1AP56279 114 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 DEFB103AP81534 67 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 FAM69BQ5VUD6 431 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 C20orf204Q6ZNR8 217 aa11.54□□□□□ -0.56
HDAC1-206ENST00000476391 HTR1DP28221 377 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 MC5RP33032 325 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 TIGITQ495A1 244 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 SLC35E4Q6ICL7 350 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 MRPL43Q8N983 215 aaKnown RBP11.53□□□□□ -0.56
HDAC1-206ENST00000476391 ZC2HC1AQ96GY0 325 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 HTTP42858 3142 aa11.53□□□□□ -0.56
HDAC1-206ENST00000476391 A6NDN8 102 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 OR2J3O76001 311 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 YPEL5P62699 121 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 SMAGPQ0VAQ4 97 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 RAB31Q13636 194 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 IBA57Q5T440 356 aaKnown RBP11.52□□□□□ -0.56
HDAC1-206ENST00000476391 ZNF841Q6ZN19 808 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.56
HDAC1-206ENST00000476391 HBZP02008 142 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 SP9P0CG40 484 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 FKBP2P26885 142 aaKnown RBP11.52□□□□□ -0.57
HDAC1-206ENST00000476391 RAB9AP51151 201 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 HSD52Q0P140 79 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 FXYD3Q14802 87 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 PDLIM3Q53GG5 364 aaPredicted RBP11.52□□□□□ -0.57
HDAC1-206ENST00000476391 TMEM97Q5BJF2 176 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 LINC00596Q86U02 117 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 OR1A1Q9P1Q5 309 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 SEC16AO15027 2179 aa11.52□□□□□ -0.57
HDAC1-206ENST00000476391 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 TMEM95Q3KNT9 176 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 KRTAP27-1Q3LI81 207 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 RNF138Q8WVD3 245 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.51□□□□□ -0.57
HDAC1-206ENST00000476391 IL1F10Q8WWZ1 152 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 WDR54Q9H977 334 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 CLCF1Q9UBD9 225 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 KIAA1549Q9HCM3 1950 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 CLDN14O95500 239 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 COX8AP10176 69 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 RPS16P62249 146 aaKnown RBP11.51□□□□□ -0.57
HDAC1-206ENST00000476391 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 DEPPQ9NTK1 212 aa11.51□□□□□ -0.57
HDAC1-206ENST00000476391 IGLV3-32A0A0A0MS00 114 aa11.5□□□□□ -0.57
HDAC1-206ENST00000476391 FOXL2P58012 376 aa11.5□□□□□ -0.57
HDAC1-206ENST00000476391 SPATA46Q5T0L3 261 aa11.5□□□□□ -0.57
HDAC1-206ENST00000476391 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
HDAC1-206ENST00000476391 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms