RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 STRAPQ9Y3F4 350 aaKnown RBP14.68□□□□□ -0.06
SMC4-211ENST00000469858 INSIG2Q9Y5U4 225 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 MED13LQ71F56 2210 aa14.68□□□□□ -0.06
SMC4-211ENST00000469858 IGHV2-70DA0A0C4DH43 119 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 COL8A1P27658 744 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 HBG1P69891 147 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 HBG2P69892 147 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 PAX2Q02962 417 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 OR8G2PQ6IF36 304 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 VMO1Q7Z5L0 202 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 MOB3BQ86TA1 216 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 OR11H6Q8NGC7 330 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 C10orf105Q8TEF2 133 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 RNF141Q8WVD5 230 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 SH3BGRL3Q9H299 93 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 IGHV1-3A0A0C4DH29 117 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 LEUTXA8MZ59 168 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 TEX46H3BTG2 121 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 UPK2O00526 184 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 IL6RP08887 468 aaPredicted RBP14.67□□□□□ -0.06
SMC4-211ENST00000469858 MYOD1P15172 320 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 C1orf122Q6ZSJ8 110 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 LILRB2Q8N423 598 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 CLCC1Q96S66 551 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 MS4A7Q9GZW8 240 aaPredicted RBP14.67□□□□□ -0.06
SMC4-211ENST00000469858 BET1LQ9NYM9 111 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 CACFD1Q9UGQ2 172 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 KPTNQ9Y664 436 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 AUP1Q9Y679 476 aa14.67□□□□□ -0.06
SMC4-211ENST00000469858 TNCP24821 2201 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 ASH1LQ9NR48 2969 aaKnown RBP14.66□□□□□ -0.06
SMC4-211ENST00000469858 SPG11Q96JI7 2443 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 DFFBO76075 338 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 HTR1DP28221 377 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 HOXA1P49639 335 aaPredicted RBP14.66□□□□□ -0.06
SMC4-211ENST00000469858 PDLIM3Q53GG5 364 aaPredicted RBP14.66□□□□□ -0.06
SMC4-211ENST00000469858 LDLRAD2Q5SZI1 272 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 HCP5Q6MZN7 132 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 PUSL1Q8N0Z8 303 aaKnown RBP14.66□□□□□ -0.06
SMC4-211ENST00000469858 PRNDQ9UKY0 176 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 OR51B2Q9Y5P1 312 aa14.66□□□□□ -0.06
SMC4-211ENST00000469858 A0A1W2PRD5 423 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 A0A1W2PRF3 423 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 A0A1W2PRM7 423 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 LY6LH3BQJ8 138 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 NDUFS8O00217 210 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 KBTBD11O94819 623 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 FAM157CP0CG43 387 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 SPP1P10451 314 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 S100A1P23297 94 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 HSPE1P61604 102 aaKnown RBP14.65□□□□□ -0.06
SMC4-211ENST00000469858 STPG2Q8N412 459 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 MARVELD3Q96A59 401 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 HIPK2Q9H2X6 1198 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 LPAR2Q9HBW0 351 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 HEYLQ9NQ87 328 aaPredicted RBP14.65□□□□□ -0.06
SMC4-211ENST00000469858 IGHV4-61A0A0C4DH41 118 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 FGF16O43320 207 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 FOXH1O75593 365 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 LRRC20Q8TCA0 184 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 TSNAXQ99598 290 aaKnown RBP14.65□□□□□ -0.06
SMC4-211ENST00000469858 HINT2Q9BX68 163 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 SIRPDQ9H106 197 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 PLA2G2EQ9NZK7 142 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 PFDN2Q9UHV9 154 aa14.65□□□□□ -0.06
SMC4-211ENST00000469858 ZNF705EA8MWA4 302 aaPredicted RBP14.64□□□□□ -0.07
SMC4-211ENST00000469858 ODF3BA8MYP8 253 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 FAM157AC9JC47 383 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 OPN1MWP04001 364 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 FGF2P09038 288 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 SEC11BP0C7V7 166 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 OPN1MW2P0DN77 364 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 OPN1MW3P0DN78 364 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 ATP6V0CP27449 155 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 VDAC2P45880 294 aaPredicted RBP14.64□□□□□ -0.07
SMC4-211ENST00000469858 SULT1A2P50226 295 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 SLC38A11Q08AI6 406 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 TPTE2P1Q5T6R2 138 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 ZNF787Q6DD87 383 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 SLC25A24Q6NUK1 477 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 RITA1Q96K30 269 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 UNKLQ9H9P5 680 aaKnown RBP14.64□□□□□ -0.07
SMC4-211ENST00000469858 DPM3Q9P2X0 92 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 CHD6Q8TD26 2715 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 IGHV4-30-2A0A087WSY4 118 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 C15orf62A8K5M9 175 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 VWC2LB2RUY7 222 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 IFNA10P01566 189 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 IFNA5P01569 189 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 IGLV2-23P01705 113 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 HOXB4P17483 251 aaPredicted RBP14.64□□□□□ -0.07
SMC4-211ENST00000469858 LHFPL4Q7Z7J7 247 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 VSTM2AQ8TAG5 236 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 HILPDAQ9Y5L2 63 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 RFNGQ9Y644 331 aa14.64□□□□□ -0.07
SMC4-211ENST00000469858 A0A1W2PPI3 338 aa14.63□□□□□ -0.07
SMC4-211ENST00000469858 RNASEK-C17orf49H0YIS7 233 aa14.63□□□□□ -0.07
SMC4-211ENST00000469858 SLC25A17O43808 307 aa14.63□□□□□ -0.07
SMC4-211ENST00000469858 TOX4O94842 621 aa14.63□□□□□ -0.07
SMC4-211ENST00000469858 LY86O95711 162 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 304.6 ms