RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	MCTS1	Q9ULC4	181 aa	Known RBP	5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329		V9GYY9	64 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	TRPM6	Q9BX84	2022 aa		5.72	□□□□□ -1.49
TRIM6-205	ENST00000445329	METTL12	A8MUP2	240 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	STC2	O76061	302 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	IGHG4	P01861	327 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	SFTPD	P35247	375 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	NANOS3	P60323	173 aa	Known RBP	5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	GAGE2B	Q13066	116 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	TESK1	Q15569	626 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	CEACAM16	Q2WEN9	425 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	GAGE2E	Q4V326	116 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	ABHD17C	Q6PCB6	329 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	H2BFWT	Q7Z2G1	175 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	MRPL24	Q96A35	216 aa	Known RBP	5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	ZG16B	Q96DA0	208 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	ADTRP	Q96IZ2	230 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	PRELID3A	Q96N28	172 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	SCNM1	Q9BWG6	230 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	CLDND1	Q9NY35	253 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	GAGE2D	Q9UEU5	116 aa		5.71	□□□□□ -1.49
TRIM6-205	ENST00000445329	LOC102723996	A0A087X1L8	192 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	TINCR	A0A1B0GVN0	87 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A1B0GWB2	263 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A1W2PRD5	423 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A1W2PRF3	423 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A1W2PRM7	423 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	RHOD	O00212	210 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	ANGPTL7	O43827	346 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	MT-CO3	P00414	261 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	THBD	P07204	575 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	FAM106CP	P0CH98	169 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	IL9	P15248	144 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	EVI2A	P22794	236 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	SNU13	P55769	128 aa	Known RBP	5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	LGALS4	P56470	323 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	ZNF90	Q03938	601 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	MFGE8	Q08431	387 aa	Predicted RBP	5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	ZIC1	Q15915	447 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	TBR1	Q16650	682 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	FAM106A	Q4KMX7	169 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	FNDC7	Q5VTL7	733 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	C2orf91	Q6ZV80	131 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	ADGRE4P	Q86SQ3	457 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	ZNF683	Q8IZ20	524 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	FBXL14	Q8N1E6	418 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR13A1	Q8NGR1	328 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR1F12	Q8NHA8	337 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	MBD3L1	Q8WWY6	194 aa		5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	LIN7C	Q9NUP9	197 aa	Known RBP	5.71	□□□□□ -1.5
TRIM6-205	ENST00000445329	TRAV1-1	A0A0B4J248	108 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	HLA-DQA2	P01906	255 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	DRD3	P35462	400 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	CXCL12	P48061	93 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	PPP1CA	P62136	330 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	FOXI1	Q12951	378 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	RUNX3	Q13761	415 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	PSG5	Q15238	335 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	MS4A13	Q5J8X5	152 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR10J3	Q5JRS4	329 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR8B3	Q8NGG8	313 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR8B2	Q96RD0	313 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	CDX2	Q99626	313 aa	Predicted RBP	5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	SFXN3	Q9BWM7	321 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	DKK4	Q9UBT3	224 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	PKIG	Q9Y2B9	76 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A0J9YW62	118 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	CRYGB	P07316	175 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	REG1B	P48304	166 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	SPEM1	Q8N4L4	309 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR6K6	Q8NGW6	343 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	OR4C3	Q8NH37	302 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	GATAD1	Q8WUU5	269 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329		Q96M85	177 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	SLC25A33	Q9BSK2	321 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	NUP210	Q8TEM1	1887 aa	Predicted RBP	5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	TRAV5	A0A0B4J249	113 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	RIIAD1	A6NNX1	92 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	HSBP1	O75506	76 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	EGR1	P18146	543 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	FRG2	Q64ET8	278 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	HRCT1	Q6UXD1	115 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	RPS4Y2	Q8TD47	263 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	BAALC	Q8WXS3	180 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	LSM10	Q969L4	123 aa	Known RBP	5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	ZNF488	Q96MN9	340 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	SCGB3A2	Q96PL1	93 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	FRG2B	Q96QU4	278 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	FAM234A	Q9H0X4	552 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	ATG10	Q9H0Y0	220 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	TMEM133	Q9H2Q1	129 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	LOXL2	Q9Y4K0	774 aa		5.7	□□□□□ -1.5
TRIM6-205	ENST00000445329	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329		A0A1W2PP11	408 aa		5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329	ZNF732	B4DXR9	585 aa		5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329		H0YIG0	161 aa		5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329		H3BMG7	143 aa		5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329	CDC42EP2	O14613	210 aa		5.69	□□□□□ -1.5
TRIM6-205	ENST00000445329	IGHV3-7	P01780	117 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms