RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TCRB	P04435	133 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	G6PC	P35575	357 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	GNB1	P62873	340 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	PRSS8	Q16651	343 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	OR4A47	Q6IF82	309 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	ZNF562	Q6V9R5	426 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	C12orf54	Q6X4T0	127 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	SLC25A42	Q86VD7	318 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	TMEM167A	Q8TBQ9	72 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	ABHD5	Q8WTS1	349 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	GON7	Q9BXV9	100 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	C20orf85	Q9H1P6	137 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	OR51J1	Q9H342	316 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	PARP11	Q9NR21	331 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	TMEM140	Q9NV12	185 aa		10.4	□□□□□ -0.74
SF1-206	ENST00000413725	FCN1	O00602	326 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	VAMP1	P23763	118 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	MAS1L	P35410	378 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	AKR1C2	P52895	323 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	PROK1	P58294	105 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	CX3CL1	P78423	397 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	SRPX	P78539	464 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	PJVK	Q0ZLH3	352 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	FXYD3	Q14802	87 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	TNXA	Q16473	311 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	H2BFWT	Q7Z2G1	175 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	ZNF695	Q8IW36	515 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	CADM3	Q8N126	398 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	KLHDC1	Q8N7A1	406 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	RNASE11	Q8TAA1	199 aa	Known RBP	10.39	□□□□□ -0.75
SF1-206	ENST00000413725	GLYATL2	Q8WU03	294 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	CHPT1	Q8WUD6	406 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	ARPC1A	Q92747	370 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	MDFI	Q99750	246 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.39	□□□□□ -0.75
SF1-206	ENST00000413725	PALMD	Q9NP74	551 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	ZNF580	Q9UK33	172 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	FLVCR2	Q9UPI3	526 aa		10.39	□□□□□ -0.75
SF1-206	ENST00000413725	TRAV6	A0A075B6T7	132 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	LINC01548	A6NM66	108 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	ATP6V0E1	O15342	81 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	SNAPC5	O75971	98 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	CDS2	O95674	445 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	IGKV1-39	P01597	117 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	IGKV1D-39	P04432	117 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	IGF1	P05019	195 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	FGF2	P09038	288 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	VDAC1	P21796	283 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	RPL8	P62917	257 aa	Known RBP	10.38	□□□□□ -0.75
SF1-206	ENST00000413725	SUPT4H1	P63272	117 aa	Known RBP	10.38	□□□□□ -0.75
SF1-206	ENST00000413725	SLC35B1	P78383	322 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	PPP1R1A	Q13522	171 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	TMEM187	Q14656	261 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.38	□□□□□ -0.75
SF1-206	ENST00000413725	STPG2	Q8N412	459 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	GRPEL2	Q8TAA5	225 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	RBPMS	Q93062	196 aa	Known RBP	10.38	□□□□□ -0.75
SF1-206	ENST00000413725	IL22RA2	Q969J5	263 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	RRNAD1	Q96FB5	475 aa	Known RBP	10.38	□□□□□ -0.75
SF1-206	ENST00000413725	SEC22A	Q96IW7	307 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	WNT10A	Q9GZT5	417 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	NUDT15	Q9NV35	164 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	NUBP2	Q9Y5Y2	271 aa		10.38	□□□□□ -0.75
SF1-206	ENST00000413725	PSMB11	A5LHX3	300 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	UPK2	O00526	184 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	SFT2D2	O95562	160 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	HLA-G	P17693	338 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	ANXA7	P20073	488 aa	Known RBP	10.37	□□□□□ -0.75
SF1-206	ENST00000413725	RAB25	P57735	213 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	NDP	Q00604	133 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.37	□□□□□ -0.75
SF1-206	ENST00000413725	MRGPRG-AS1	Q2M3A8	158 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	C4orf46	Q504U0	113 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	TMEM268	Q5VZI3	342 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	LGI3	Q8N145	548 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	C3orf56	Q8N813	242 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	SGMS2	Q8NHU3	365 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	WFDC12	Q8WWY7	111 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	TMEM56	Q96MV1	263 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	NOL4L	Q96MY1	436 aa	Predicted RBP	10.37	□□□□□ -0.75
SF1-206	ENST00000413725	PHB2	Q99623	299 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	LINC00527	Q9UJ94	153 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	TMEM56-RWDD3	S4R434	201 aa		10.37	□□□□□ -0.75
SF1-206	ENST00000413725	WNK1	Q9H4A3	2382 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	TRAV41	A0A0B4J266	112 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	HLA-A	P01891	365 aa	Known RBP	10.36	□□□□□ -0.75
SF1-206	ENST00000413725	IL6R	P08887	468 aa	Predicted RBP	10.36	□□□□□ -0.75
SF1-206	ENST00000413725	H2AFB2	P0C5Z0	115 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	OR4E1	P0C645	316 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	RPL27A	P46776	148 aa	Known RBP	10.36	□□□□□ -0.75
SF1-206	ENST00000413725	CRIP2	P52943	208 aa	Predicted RBP	10.36	□□□□□ -0.75
SF1-206	ENST00000413725	ECSCR	Q19T08	205 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	NRARP	Q7Z6K4	114 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	LYG2	Q86SG7	212 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	FAM219A	Q8IW50	185 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	SELENOH	Q8IZQ5	122 aa	Known RBP	10.36	□□□□□ -0.75
SF1-206	ENST00000413725	OR4A16	Q8NH70	328 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	LHFPL5	Q8TAF8	219 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	CASTOR1	Q8WTX7	329 aa		10.36	□□□□□ -0.75
SF1-206	ENST00000413725	SRSF12	Q8WXF0	261 aa	Known RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms