RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 HOXA6P31267 233 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 NPIPB3Q92617 1050 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 GEMIN7Q9H840 131 aaKnown RBP12.64□□□□□ -0.39
LRRK1-201ENST00000388948 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 RAMP1O60894 148 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 KBTBD11O94819 623 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 DLK1P80370 383 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 UBE2V2Q15819 145 aa12.64□□□□□ -0.39
LRRK1-201ENST00000388948 IFI6P09912 130 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 DSCR9P59020 149 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.63□□□□□ -0.39
LRRK1-201ENST00000388948 MOSP00540 346 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 PRSS2P07478 247 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 UBE2DNLQ8IWF7 75 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 LYRM2Q9NU23 88 aaPredicted RBP12.63□□□□□ -0.39
LRRK1-201ENST00000388948 COL4A1P02462 1669 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
LRRK1-201ENST00000388948 C10orf128Q5T292 105 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 C3orf56Q8N813 242 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 TMEM101Q96IK0 257 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 KCNE5Q9UJ90 142 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 TRAV40A0A0B4J280 105 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 LYNX1G3V0Z9 82 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 KLF4O43474 513 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 CELA3BP08861 270 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 LYNX1P0DP58 116 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 RUNX1Q01196 453 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 TCF19Q9Y242 345 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 H7C2G1 150 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 MEIG1Q5JSS6 88 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
LRRK1-201ENST00000388948 SERF2P84101 59 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 ZCCHC24Q8N2G6 241 aaKnown RBP12.62□□□□□ -0.39
LRRK1-201ENST00000388948 PRSS53Q2L4Q9 553 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 CBY3A6NI87 242 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 ZNF146Q15072 292 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 CLLU1Q5K131 121 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 SCN8AQ9UQD0 1980 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
LRRK1-201ENST00000388948 FOXA2Q9Y261 457 aaPredicted RBP12.62□□□□□ -0.39
LRRK1-201ENST00000388948 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
LRRK1-201ENST00000388948 IGHV3OR16-8A0A075B7F1 116 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 M0QZK8 103 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
LRRK1-201ENST00000388948 AQP3Q92482 292 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 IBA57Q5T440 356 aaKnown RBP12.61□□□□□ -0.39
LRRK1-201ENST00000388948 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
LRRK1-201ENST00000388948 FOXB2Q5VYV0 432 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 CLDND2Q8NHS1 167 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 PSME4Q14997 1843 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 PSG7Q13046 419 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 PRSS23O95084 383 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 FAM166AQ6J272 317 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 SIRT4Q9Y6E7 314 aaPredicted RBP12.61□□□□□ -0.39
LRRK1-201ENST00000388948 NMUP48645 174 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 CIRBPQ14011 172 aaKnown RBP12.61□□□□□ -0.39
LRRK1-201ENST00000388948 TMEM177Q53S58 311 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 LDLRAD2Q5SZI1 272 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 HSF4Q9ULV5 492 aa12.61□□□□□ -0.39
LRRK1-201ENST00000388948 IGKV1D-42A0A075B6H8 117 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 NDUFB4O95168 129 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 CD1AP06126 327 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 CYB5R2Q6BCY4 276 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
LRRK1-201ENST00000388948 SRSF12Q8WXF0 261 aaKnown RBP12.6□□□□□ -0.39
LRRK1-201ENST00000388948 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 NEU1Q99519 415 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 MMP9P14780 707 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 MYOD1P15172 320 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 MARVELD3Q96A59 401 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 B4DEV8 164 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 WISP3O95389 354 aaPredicted RBP12.6□□□□□ -0.39
LRRK1-201ENST00000388948 IGHMP01871 453 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 GZMMP51124 257 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 FAM74A7A6NL05 159 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 ZP3P21754 424 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 LHX2P50458 406 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 ZFP36L1Q07352 338 aaKnown RBP12.6□□□□□ -0.39
LRRK1-201ENST00000388948 AWAT1Q58HT5 328 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
LRRK1-201ENST00000388948 H0YL77 283 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms