RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
USP6NL-202ENST00000379237 ADTRPQ96IZ2 230 aa9.27□□□□□ -0.93
USP6NL-202ENST00000379237 DEPPQ9NTK1 212 aa9.27□□□□□ -0.93
USP6NL-202ENST00000379237 EYSQ5T1H1 3165 aa9.27□□□□□ -0.93
USP6NL-202ENST00000379237 TRIOBPQ9H2D6 2365 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 PCBD1P61457 104 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 PLP2Q04941 152 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 SPSB4Q96A44 273 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 SSTR5P35346 364 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 PLA2G5P39877 138 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 SEC11AP67812 179 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 HSD52Q0P140 79 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 HSD17B10Q99714 261 aaKnown RBP9.26□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF355PQ9NSJ1 428 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 TMPRSS2O15393 492 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF32P17041 273 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 HES3Q5TGS1 186 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 BHLHA15Q7RTS1 189 aaPredicted RBP9.26□□□□□ -0.93
USP6NL-202ENST00000379237 AAED1Q7RTV5 226 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 FAM216AQ8WUB2 273 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 SH2D2AQ9NP31 389 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 PILRBQ9UKJ0 227 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 YTHDF2Q9Y5A9 579 aaKnown RBP9.26□□□□□ -0.93
USP6NL-202ENST00000379237 CLEC3BP05452 202 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 GCHFRP30047 84 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 SLC25A47Q6Q0C1 308 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 IL36GQ9NZH8 169 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 AHCTF1Q8WYP5 2266 aa9.26□□□□□ -0.93
USP6NL-202ENST00000379237 A0A0G2JMM0 328 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 A0A1W2PPB8 328 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 KIR3DP1A8MWS1 328 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 WISP1O95388 367 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 DUSP13Q9UII6 198 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF257Q9Y2Q1 563 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 TSSC4Q9Y5U2 329 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-202ENST00000379237 ARHGEF17Q96PE2 2063 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-202ENST00000379237 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 C22orf46C9J442 243 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 LPAL2Q16609 132 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 PPIAL4EA0A075B759 164 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 PPIAL4FP0DN26 164 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 CCL1P22362 96 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 CEACAM3P40198 252 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 DCAF12Q5T6F0 453 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 SLC25A40Q8TBP6 338 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 TMEM167BQ9NRX6 74 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 DOPEY2Q9Y3R5 2298 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 PAPPA2Q9BXP8 1791 aa9.25□□□□□ -0.93
USP6NL-202ENST00000379237 TRAV26-1A0A087WT03 109 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 A1L4Q6 167 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 MLNRO43193 412 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 YPEL1O60688 119 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 WNT2P09544 360 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 FRMD6-AS1P0C7T7 363 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CTRLP40313 264 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 ZNF488Q96MN9 340 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 YPEL2Q96QA6 119 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 FAM90A26D6RGX4 464 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 SCGB2A1O75556 95 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 NPPCP23582 126 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CSN1S1P47710 185 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CCR5P51681 352 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 GFERP55789 205 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 OR13H1Q8NG92 308 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 C5orf30Q96GV9 206 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
USP6NL-202ENST00000379237 TP53TG3Q9ULZ0 132 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 RNF114Q9Y508 228 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CNIH1O95406 144 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CGAP01215 116 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 LYSMD4Q5XG99 296 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 SF3B5Q9BWJ5 86 aaKnown RBP9.24□□□□□ -0.93
USP6NL-202ENST00000379237 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CHODLQ9H9P2 273 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 CX3CL1P78423 397 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 LHFPL4Q7Z7J7 247 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 VSTM2AQ8TAG5 236 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 TMEM38BQ9NVV0 291 aa9.24□□□□□ -0.93
USP6NL-202ENST00000379237 IGKV1-12A0A0C4DH73 117 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 E9PLN8 166 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 IGKV1D-12P01611 117 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 ARR3P36575 388 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 RHOGP84095 191 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 ZIC4Q8N9L1 334 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 OR1L1Q8NH94 360 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 GNG12Q9UBI6 72 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 SH2D7A6NKC9 451 aaPredicted RBP9.23□□□□□ -0.93
USP6NL-202ENST00000379237 FTH1P19P0C7X4 201 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 C18orf32Q8TCD1 76 aa9.23□□□□□ -0.93
USP6NL-202ENST00000379237 BRWD3Q6RI45 1802 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms