RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 CABIN1Q9Y6J0 2220 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 PRSS8Q16651 343 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 IL4P05112 153 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 UNC13CQ8NB66 2214 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 CIRBPQ14011 172 aaKnown RBP12.63□□□□□ -0.39
CHD4-201ENST00000357008 CLDND2Q8NHS1 167 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 H3BTX0 84 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 COX6A1P12074 109 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 RTN4RQ9BZR6 473 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 FAM186AA6NE01 2351 aa12.63□□□□□ -0.39
CHD4-201ENST00000357008 CCL21O00585 134 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 BTCP35070 178 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 DLX6P56179 175 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
CHD4-201ENST00000357008 WNT10AQ9GZT5 417 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 SPAARA0A1B0GVQ0 90 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
CHD4-201ENST00000357008 PTPRFP10586 1907 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 RNFT1Q5M7Z0 435 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 A0A1B0GTI1 187 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 PF4V1P10720 104 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 TFPI2P48307 235 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 PCOLCEQ15113 449 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 LINC00305Q7Z4B0 112 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 GPR82Q96P67 336 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 LINC00470Q9BZP3 86 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 ICE1Q9Y2F5 2266 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 REG1AP05451 166 aa12.62□□□□□ -0.39
CHD4-201ENST00000357008 AKIRIN1Q9H9L7 192 aaPredicted RBP12.61□□□□□ -0.39
CHD4-201ENST00000357008 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
CHD4-201ENST00000357008 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 MRPL13Q9BYD1 178 aaKnown RBP12.61□□□□□ -0.39
CHD4-201ENST00000357008 SLC17A3O00476 420 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 C14orf144Q96I85 54 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
CHD4-201ENST00000357008 TBR1Q16650 682 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
CHD4-201ENST00000357008 LINC00587B1AMM8 73 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 UBE2L6O14933 153 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 PAPPA-AS1Q5QFB9 102 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 ASXL3Q9C0F0 2248 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 CGAP01215 116 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 CTSSP25774 331 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 LINC00114Q6XXX2 140 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 SPRED2Q7Z698 418 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 DDB2Q92466 427 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 IMMP2LQ96T52 175 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 PPIAL4CA0A0B4J2A2 164 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 PPIAL4GP0DN37 164 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
CHD4-201ENST00000357008 TNFSF10P50591 281 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 IFI27L2Q9H2X8 130 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 SOX21Q9Y651 276 aaPredicted RBP12.6□□□□□ -0.39
CHD4-201ENST00000357008 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 RAMP1O60894 148 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 NR2C2APQ86WQ0 139 aa12.6□□□□□ -0.39
CHD4-201ENST00000357008 SPSB2Q99619 263 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 C12orf77C9JDV5 145 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 GPX1P07203 203 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 TFF3Q07654 80 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 NIT1Q86X76 327 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 TUBGCP6Q96RT7 1819 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 NEUROG1Q92886 237 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 NPIPB11E5RHQ5 1161 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 EMP1P54849 157 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 TTC9CQ8N5M4 171 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 CLEC7AQ9BXN2 247 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 SYNGR3O43761 229 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 MOSP00540 346 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
CHD4-201ENST00000357008 SCN4AP35499 1836 aa12.58□□□□□ -0.39
CHD4-201ENST00000357008 IGHV3-48P01763 117 aa12.58□□□□□ -0.39
CHD4-201ENST00000357008 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.39
CHD4-201ENST00000357008 LRTM2Q8N967 370 aa12.58□□□□□ -0.39
CHD4-201ENST00000357008 OSR1Q8TAX0 266 aaPredicted RBP12.58□□□□□ -0.39
CHD4-201ENST00000357008 TRIP12Q14669 1992 aaPredicted RBP12.58□□□□□ -0.4
CHD4-201ENST00000357008 ZNF525Q8N782 197 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 PRELID3AQ96N28 172 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 TMEM160Q9NX00 188 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 IGKV1D-43A0A0B4J1Z2 117 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 CDCP2Q5VXM1 449 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 SAP25Q8TEE9 199 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 PEX7O00628 323 aa12.58□□□□□ -0.4
CHD4-201ENST00000357008 CYB5R2Q6BCY4 276 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms