RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PDFQ9HBH1 243 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 COPZ2Q9P299 210 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RPS6KB2Q9UBS0 482 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NUFIP1Q9UHK0 495 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 C14orf166Q9Y224 244 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NDUFAF1Q9Y375 327 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 WSB1Q9Y6I7 421 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TICRRQ7Z2Z1 1910 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 EP300Q09472 2414 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TLN1Q9Y490 2541 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ARL5CA6NH57 179 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 M0R233 179 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PSMD12O00232 456 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 MRASO14807 208 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IGLV1-47P01700 117 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 FBP1P09467 338 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NELFEP18615 380 aaKnown RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 S100PP25815 95 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 S100GP29377 79 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SDC4P31431 198 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PPP1CAP62136 330 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ELOCQ15369 112 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TAF1AQ15573 450 aaPredicted RBP1.05□□□□□ -2.24
BRCA1-202ENST00000354071 MOGQ16653 247 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 LRRC26Q2I0M4 334 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ACSM3Q53FZ2 586 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 SPIN4Q56A73 249 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 UGT2A3Q6UWM9 527 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 LRRN1Q6UXK5 716 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 Q6ZR54 194 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TCF23Q7RTU1 214 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 RAB2BQ8WUD1 216 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TCEAL4Q96EI5 215 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 PITX2Q99697 317 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GNB1LQ9BYB4 327 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 HRASLSQ9HDD0 168 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 GNG13Q9P2W3 67 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 TBX21Q9UL17 535 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 ARL5AQ9Y689 179 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 LOXHD1Q8IVV2 1947 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 NACAE9PAV3 2078 aa1.05□□□□□ -2.24
BRCA1-202ENST00000354071 IFT172Q9UG01 1749 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CACNA1DQ01668 2161 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 A0A1B0GTI1 187 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FAM183AA6NL82 134 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM210A6NLX4 147 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 F5H5K5 113 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 J3QR89 54 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR2B3O76000 313 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 YIF1AO95070 293 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR5F1O95221 314 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IGKV3-15P01624 115 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV3-11P01762 117 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PSMB2P49721 201 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GNG10P50151 68 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ERVS71-1P61550 626 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FAM3AP98173 230 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GTF2BQ00403 316 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 AESQ08117 197 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FADDQ13158 208 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF678Q5SXM1 525 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 LPCAT4Q643R3 524 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 GTF2H5Q6ZYL4 71 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF767PQ75MW2 155 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF695Q8IW36 515 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF283Q8N7M2 679 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 SLC25A29Q8N8R3 303 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ACBD4Q8NC06 268 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM161BQ8NDZ6 487 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR4P4Q8NGL7 312 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 MFSD8Q8NHS3 518 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ITLN2Q8WWU7 325 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ACOT12Q8WYK0 555 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FOPNLQ96NB1 174 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TIPINQ9BVW5 301 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF471Q9BX82 626 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PARP11Q9NR21 331 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 C19orf12Q9NSK7 152 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PAQR5Q9NXK6 330 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF586Q9NXT0 402 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TGP01266 2768 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CLUHO75153 1309 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 ATG2AQ2TAZ0 1938 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CARMIL3Q8ND23 1372 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 RIMS2Q9UQ26 1411 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 FXYD6-FXYD2A0A087WZ82 144 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV3-49A0A0A0MS15 119 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 A0A0G2JMP0 313 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CENPVL3A0A0U1RRI6 287 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PVALEFA0A1B0GWK0 134 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM72A0PK05 275 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 OR6C6A6NF89 314 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP9-6A8MVA2 160 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CRXO43186 299 aaPredicted RBP1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CHST10O43529 356 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 PLIN3O60664 434 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CST8O60676 142 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 UGT2B11O75310 529 aa1.04□□□□□ -2.24
BRCA1-202ENST00000354071 CPSF4O95639 269 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms