RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RPL39P5Q59GN2 51 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM45BQ96B21 275 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 FBXL15Q9H469 300 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 CADP27708 2225 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CFDP00746 253 aaPredicted RBP10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CRPP02741 224 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CRYBA2P53672 197 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 NANOS3P60323 173 aaKnown RBP10.07□□□□□ -0.8
SHANK2-201ENST00000338508 NPC2P61916 151 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 NRN1LQ496H8 165 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 TDGF1P3P51864 188 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 C12orf54Q6X4T0 127 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 FAM169BQ8N8A8 192 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CEP290O15078 2479 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CA11O75493 328 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 GPR146Q96CH1 333 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 LRRC3BQ96PB8 259 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM74BQ9NUR3 256 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 MARCH11A6NNE9 402 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 RAG2P55895 527 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHANK2-201ENST00000338508 PRDM6Q9NQX0 595 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 LOC390937A0A1W2PQ73 354 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 C8orf88P0DMB2 117 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CD24P25063 80 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM42Q69YG0 159 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 CD300LDQ6UXZ3 194 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF688P0C7X2 276 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 ASIPP42127 132 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 SLC22A18ASQ8N1D0 253 aa10.07□□□□□ -0.8
SHANK2-201ENST00000338508 POLEQ07864 2286 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 CACNA1GO43497 2377 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 TSPAN7P41732 249 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 CYB5R2Q6BCY4 276 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 CLDND2Q8NHS1 167 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 SYNGR3O43761 229 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 C10orf111Q8N326 155 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 SCARF2Q96GP6 870 aaPredicted RBP10.06□□□□□ -0.8
SHANK2-201ENST00000338508 CDKN1AP38936 164 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 ZP4Q12836 540 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 LDLRAD2Q5SZI1 272 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 V9GYH0 126 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
SHANK2-201ENST00000338508 ZDBF2Q9HCK1 2354 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 FOXS1O43638 330 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF831Q5JPB2 1677 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 A0A1W2PPV9 198 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 H0YL77 283 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 PSCAO43653 123 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 NAT1P18440 290 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 VDAC2P45880 294 aaPredicted RBP10.06□□□□□ -0.8
SHANK2-201ENST00000338508 EFNB1P98172 346 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 SRXN1Q9BYN0 137 aa10.06□□□□□ -0.8
SHANK2-201ENST00000338508 PEX7O00628 323 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 ELF5Q9UKW6 265 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 SERF2P84101 59 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 GTF3C1Q12789 2109 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 OR9G4Q8NGQ1 327 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF501Q96CX3 271 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 CD7P09564 240 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 FAM27BQ5VT28 67 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 GTSCR1Q86UQ5 136 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 C14orf144Q96I85 54 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 ZNF414Q96IQ9 312 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 H3BRM9 83 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 HOXD4P09016 255 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 TNFSF18Q9UNG2 199 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 GLI3P10071 1580 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 TRGV4A0A0C4DH28 118 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 AGAP20933 346 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-201ENST00000338508 TNFRSF9Q07011 255 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 FAM209BQ5JX69 171 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 WDR34Q96EX3 536 aa10.05□□□□□ -0.8
SHANK2-201ENST00000338508 COLCA1Q6ZS62 124 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 TCRBV4S1A1TA0A5B7 111 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 NDUFA2O43678 99 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 FGF5P12034 268 aa10.04□□□□□ -0.8
SHANK2-201ENST00000338508 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms