RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PARD6GQ9BYG4 376 aaPredicted RBP16.48■□□□□ 0.23
CRLF3-201ENST00000324238 GABRA6Q16445 453 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 SLC35E4Q6ICL7 350 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 OR2Z1Q8NG97 314 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 OR5R1Q8NH85 324 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 FOXH1O75593 365 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 TEX38Q6PEX7 206 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 CBLN4Q9NTU7 201 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 NBASA2RRP1 2371 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 ABCA1O95477 2261 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 ACTL6BO94805 426 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 TACC2O95359 2948 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 PDLIM3Q53GG5 364 aaPredicted RBP16.47■□□□□ 0.23
CRLF3-201ENST00000324238 HES4Q9HCC6 221 aa16.47■□□□□ 0.23
CRLF3-201ENST00000324238 SLC31A2O15432 143 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 GGCTO75223 188 aaKnown RBP16.46■□□□□ 0.23
CRLF3-201ENST00000324238 HOXC12P31275 282 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 TNFSF10P50591 281 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 CNN1P51911 297 aaKnown RBP16.46■□□□□ 0.23
CRLF3-201ENST00000324238 PAX5Q02548 391 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 TREML4Q6UXN2 200 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 TGIF2LYQ8IUE0 185 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 C9orf106Q8NAJ2 232 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 OR4A16Q8NH70 328 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 RELNP78509 3460 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 C17orf112F2Z3M2 114 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 HLA-DRB5Q30154 266 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 ANAPC16Q96DE5 110 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 MGST2Q99735 147 aa16.46■□□□□ 0.23
CRLF3-201ENST00000324238 OPN3Q9H1Y3 402 aaPredicted RBP16.46■□□□□ 0.23
CRLF3-201ENST00000324238 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.23
CRLF3-201ENST00000324238 CECR9P0C854 216 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 CBLN1P23435 193 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 TRIP6Q15654 476 aaKnown RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 DEFB124Q8NES8 71 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 OCC1Q8TAD7 63 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 SEPSECSQ9HD40 501 aaKnown RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 WDR83OSQ9Y284 106 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 YLPM1P49750 1951 aaKnown RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 DUTP33316 252 aaKnown RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 TMEM178AQ8NBL3 297 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 YTHDF2Q9Y5A9 579 aaKnown RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 PXMP4Q9Y6I8 212 aa16.45■□□□□ 0.22
CRLF3-201ENST00000324238 ANKRD11Q6UB99 2663 aaPredicted RBP16.45■□□□□ 0.22
CRLF3-201ENST00000324238 ZNF883P0CG24 379 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 PRDX2P32119 198 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 FAM214BQ7L5A3 538 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 MOB3BQ86TA1 216 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 CIB3Q96Q77 187 aaPredicted RBP16.44■□□□□ 0.22
CRLF3-201ENST00000324238 TAAR6Q96RI8 345 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 KCNIP4Q6PIL6 250 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 DUX4L9Q6RFH8 374 aaPredicted RBP16.44■□□□□ 0.22
CRLF3-201ENST00000324238 ZBTB34Q8NCN2 500 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 TMEM18Q96B42 140 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 GMPPAQ96IJ6 420 aaPredicted RBP16.44■□□□□ 0.22
CRLF3-201ENST00000324238 MRPL37Q9BZE1 423 aaKnown RBP16.44■□□□□ 0.22
CRLF3-201ENST00000324238 SPINT2O43291 252 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 SLC35B1P78383 322 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 OR5I1Q13606 314 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 MSMPQ1L6U9 139 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 TDRG1Q3Y452 100 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 CXXC4Q9H2H0 198 aa16.44■□□□□ 0.22
CRLF3-201ENST00000324238 ADMP35318 185 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 WDR31Q8NA23 367 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 RNASEH2CQ8TDP1 164 aaKnown RBP16.43■□□□□ 0.22
CRLF3-201ENST00000324238 ZNRD1Q9P1U0 126 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 ZNF705FA8MVS1 300 aaPredicted RBP16.43■□□□□ 0.22
CRLF3-201ENST00000324238 F2Z2F3 143 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 F6UZH7 168 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 C15orf65H3BRN8 121 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 ZNF705DP0CH99 300 aaPredicted RBP16.43■□□□□ 0.22
CRLF3-201ENST00000324238 ZNF705BP0CI00 300 aaPredicted RBP16.43■□□□□ 0.22
CRLF3-201ENST00000324238 G0S2P27469 103 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 SFRP2Q96HF1 295 aa16.43■□□□□ 0.22
CRLF3-201ENST00000324238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 GATA2P23769 480 aaPredicted RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 RPL15P61313 204 aaKnown RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 AHRRA9YTQ3 701 aa16.42■□□□□ 0.22
CRLF3-201ENST00000324238 KIR2DL2P43627 348 aaPredicted RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 VWC2Q2TAL6 325 aa16.42■□□□□ 0.22
CRLF3-201ENST00000324238 GBGT1Q8N5D6 347 aa16.42■□□□□ 0.22
CRLF3-201ENST00000324238 CISD2Q8N5K1 135 aaKnown RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 DEFB108BQ8NET1 73 aa16.42■□□□□ 0.22
CRLF3-201ENST00000324238 ACY3Q96HD9 319 aa16.42■□□□□ 0.22
CRLF3-201ENST00000324238 HSD17B10Q99714 261 aaKnown RBP16.42■□□□□ 0.22
CRLF3-201ENST00000324238 IGKV1D-17A0A075B6S4 117 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 KITLGP21583 273 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 DEFB109BQ30KR1 87 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 COA6Q5JTJ3 125 aaKnown RBP16.41■□□□□ 0.22
CRLF3-201ENST00000324238 C1orf159Q96HA4 380 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 GGTLC1Q9BX51 225 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 ZDHHC11Q9H8X9 412 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 FKBP11Q9NYL4 201 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 MDFIC2A0A1B0GVS7 189 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 TMEM210A6NLX4 147 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 SRP14P37108 136 aaKnown RBP16.41■□□□□ 0.22
CRLF3-201ENST00000324238 SMIM21Q3B7S5 101 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 PLA2G2CQ5R387 149 aa16.41■□□□□ 0.22
CRLF3-201ENST00000324238 CYB5R2Q6BCY4 276 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms