RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FAM169BQ8N8A8 192 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 FAM210BQ96KR6 192 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 ATRXP46100 2492 aa9.52□□□□□ -0.88
PTPN2-201ENST00000309660 IGLV3-9A0A075B6K5 115 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
PTPN2-201ENST00000309660 C1orf87Q8N0U7 546 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 TOLLIPQ9H0E2 274 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 PARLQ9H300 379 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 RELNP78509 3460 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 OR4A47Q6IF82 309 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 FAM122AQ96E09 287 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 MS4A5Q9H3V2 200 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 IL19Q9UHD0 177 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 TIMM9Q9Y5J7 89 aa9.52□□□□□ -0.89
PTPN2-201ENST00000309660 F2RL2O00254 374 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 LHBP01229 141 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 CCL3L1P16619 93 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 HNF1AP20823 631 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 RELBQ01201 579 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 IGF2-ASQ6U949 168 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 GAB2Q9UQC2 676 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 A0A087WWC5 75 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 C11orf94C9JXX5 98 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 UBE2CO00762 179 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 RD3LP0DJH9 198 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 RAB7AP51149 207 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 RPP30P78346 268 aaKnown RBP9.51□□□□□ -0.89
PTPN2-201ENST00000309660 PNRC1Q12796 327 aaPredicted RBP9.51□□□□□ -0.89
PTPN2-201ENST00000309660 KRTCAP3Q53RY4 240 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 GAFA1Q96PS6 74 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 DOK5Q9P104 306 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 ABCA1O95477 2261 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 IGKV1-16P04430 117 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 CEACAM8P31997 349 aaPredicted RBP9.51□□□□□ -0.89
PTPN2-201ENST00000309660 CFHR2P36980 270 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 BSXQ3C1V8 233 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 P2RX4Q99571 388 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
PTPN2-201ENST00000309660 DYSFO75923 2080 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 DPRXA6NFQ7 191 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 GFRA3O60609 400 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 CLN5O75503 358 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 ACTL6BO94805 426 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 ATP5G3P48201 142 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 GNB2P62879 340 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 STUMQ69YW2 141 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 C16orf82Q7Z2V1 217 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 ZNF251Q9BRH9 671 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 SAP30LQ9HAJ7 183 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 NAT8Q9UHE5 227 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 WDR83OSQ9Y284 106 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 A0A1W2PPQ1 181 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 RPL31P62899 125 aaKnown RBP9.5□□□□□ -0.89
PTPN2-201ENST00000309660 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
PTPN2-201ENST00000309660 SPNS3Q6ZMD2 512 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 METTL1Q9UBP6 276 aaKnown RBP9.5□□□□□ -0.89
PTPN2-201ENST00000309660 PXMP4Q9Y6I8 212 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 PGPEP1LA6NFU8 196 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 H7BYZ3 331 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 NPY1RP25929 384 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 CHRNA7P36544 502 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 YPEL4Q96NS1 127 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 PARD6GQ9BYG4 376 aaPredicted RBP9.5□□□□□ -0.89
PTPN2-201ENST00000309660 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 IDI2-AS1Q9NZ38 188 aa9.5□□□□□ -0.89
PTPN2-201ENST00000309660 SLC25A10Q9UBX3 287 aaPredicted RBP9.5□□□□□ -0.89
PTPN2-201ENST00000309660 B4DEV8 164 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 TCF23Q7RTU1 214 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 SLC24A4Q8NFF2 622 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 ELOVL1Q9BW60 279 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 A0A1B0GWJ7 208 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 KBTBD11O94819 623 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 IGHV2-5P01817 119 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 S100A8P05109 93 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
PTPN2-201ENST00000309660 ADIPOQQ15848 244 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 MOB3BQ86TA1 216 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 NEIL1Q96FI4 390 aaPredicted RBP9.49□□□□□ -0.89
PTPN2-201ENST00000309660 OR5B12Q96R08 314 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 LRFN3Q9BTN0 628 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 DERL1Q9BUN8 251 aa9.49□□□□□ -0.89
PTPN2-201ENST00000309660 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
PTPN2-201ENST00000309660 NKX6-3A6NJ46 265 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BKO60814 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 NDUFB4O95168 129 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 CA2P00918 260 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BJP06899 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BOP23527 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BBP33778 126 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms