RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GALNT14Q96FL9 552 aa19.33■□□□□ 0.68
HOXC9-201ENST00000303450 PARP11Q9NR21 331 aa19.33■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM140Q9NV12 185 aa19.33■□□□□ 0.68
HOXC9-201ENST00000303450 BET1LQ9NYM9 111 aa19.33■□□□□ 0.68
HOXC9-201ENST00000303450 TNCP24821 2201 aa19.33■□□□□ 0.68
HOXC9-201ENST00000303450 IGKV1-39P01597 117 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 IGKV1D-39P04432 117 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 ANXA3P12429 323 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 PROK1P58294 105 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 C12orf54Q6X4T0 127 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 SLC25A42Q86VD7 318 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 OR4A5Q8NH83 315 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM167AQ8TBQ9 72 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 ENKURQ8TC29 256 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 NOL4LQ96MY1 436 aaPredicted RBP19.32■□□□□ 0.68
HOXC9-201ENST00000303450 C20orf85Q9H1P6 137 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 ZNF430Q9H8G1 570 aaPredicted RBP19.32■□□□□ 0.68
HOXC9-201ENST00000303450 LINC00527Q9UJ94 153 aa19.32■□□□□ 0.68
HOXC9-201ENST00000303450 ACTL6BO94805 426 aa19.31■□□□□ 0.68
HOXC9-201ENST00000303450 ATG12O94817 140 aa19.31■□□□□ 0.68
HOXC9-201ENST00000303450 VAMP1P23763 118 aa19.31■□□□□ 0.68
HOXC9-201ENST00000303450 SUPT4H1P63272 117 aaKnown RBP19.31■□□□□ 0.68
HOXC9-201ENST00000303450 FXYD3Q14802 87 aa19.31■□□□□ 0.68
HOXC9-201ENST00000303450 KLHDC1Q8N7A1 406 aa19.31■□□□□ 0.68
HOXC9-201ENST00000303450 ATP6V0E1O15342 81 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 UBE2MP61081 183 aaKnown RBP19.3■□□□□ 0.68
HOXC9-201ENST00000303450 NDPQ00604 133 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 TNXAQ16473 311 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 MRGPRG-AS1Q2M3A8 158 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 SEC22AQ96IW7 307 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 WNT10AQ9GZT5 417 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 CDS2O95674 445 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 IGF1P05019 195 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 PPP1R1AQ13522 171 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM187Q14656 261 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 H2BFWTQ7Z2G1 175 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 CENPVQ7Z7K6 275 aaPredicted RBP19.3■□□□□ 0.68
HOXC9-201ENST00000303450 ZNF695Q8IW36 515 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 STPG2Q8N412 459 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 CHPT1Q8WUD6 406 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 ARPC1AQ92747 370 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 NUDT15Q9NV35 164 aa19.3■□□□□ 0.68
HOXC9-201ENST00000303450 TRAV6A0A075B6T7 132 aa19.29■□□□□ 0.68
HOXC9-201ENST00000303450 UPK2O00526 184 aa19.29■□□□□ 0.68
HOXC9-201ENST00000303450 AKR1C2P52895 323 aa19.29■□□□□ 0.68
HOXC9-201ENST00000303450 RPL8P62917 257 aaKnown RBP19.29■□□□□ 0.68
HOXC9-201ENST00000303450 GRPEL2Q8TAA5 225 aa19.29■□□□□ 0.68
HOXC9-201ENST00000303450 TRAV3A0A0B4J244 114 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 IL6RP08887 468 aaPredicted RBP19.28■□□□□ 0.68
HOXC9-201ENST00000303450 ANXA7P20073 488 aaKnown RBP19.28■□□□□ 0.68
HOXC9-201ENST00000303450 CADM3Q8N126 398 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 RNASE11Q8TAA1 199 aaKnown RBP19.28■□□□□ 0.68
HOXC9-201ENST00000303450 RBPMSQ93062 196 aaKnown RBP19.28■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM56Q96MV1 263 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 FAM103A1Q9BTL3 118 aaKnown RBP19.28■□□□□ 0.68
HOXC9-201ENST00000303450 GON7Q9BXV9 100 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 PRR13Q9NZ81 148 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM56-RWDD3S4R434 201 aa19.28■□□□□ 0.68
HOXC9-201ENST00000303450 SNAPC5O75971 98 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 SFT2D2O95562 160 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 HLA-GP17693 338 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 VDAC1P21796 283 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 MAS1LP35410 378 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 SRPXP78539 464 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 SSBP2P81877 361 aaPredicted RBP19.27■□□□□ 0.68
HOXC9-201ENST00000303450 TMEM268Q5VZI3 342 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 NRARPQ7Z6K4 114 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 SELENOHQ8IZQ5 122 aaKnown RBP19.27■□□□□ 0.68
HOXC9-201ENST00000303450 C3orf56Q8N813 242 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 LHFPL5Q8TAF8 219 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 WFDC12Q8WWY7 111 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 RRNAD1Q96FB5 475 aaKnown RBP19.27■□□□□ 0.68
HOXC9-201ENST00000303450 ZNF580Q9UK33 172 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 FBXO7Q9Y3I1 522 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 NUBP2Q9Y5Y2 271 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 WSB1Q9Y6I7 421 aa19.27■□□□□ 0.68
HOXC9-201ENST00000303450 PSMB11A5LHX3 300 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 IGKV1-5P01602 117 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 H2AFB2P0C5Z0 115 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 OR4E1P0C645 316 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 SLC35B1P78383 322 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 TMEM267Q0VDI3 215 aaPredicted RBP19.26■□□□□ 0.67
HOXC9-201ENST00000303450 ECSCRQ19T08 205 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 C4orf46Q504U0 113 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 SGMS2Q8NHU3 365 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 CASTOR1Q8WTX7 329 aa19.26■□□□□ 0.67
HOXC9-201ENST00000303450 TRAV41A0A0B4J266 112 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 HLA-AP01891 365 aaKnown RBP19.25■□□□□ 0.67
HOXC9-201ENST00000303450 OR9G9P0C7N8 305 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 EGR2P11161 476 aaPredicted RBP19.25■□□□□ 0.67
HOXC9-201ENST00000303450 LGI3Q8N145 548 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 SRSF12Q8WXF0 261 aaKnown RBP19.25■□□□□ 0.67
HOXC9-201ENST00000303450 IL22RA2Q969J5 263 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 PALMDQ9NP74 551 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 NSG2Q9Y328 171 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 G3V318 75 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 ZNF329Q86UD4 541 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 DUSP18Q8NEJ0 188 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 LFNGQ8NES3 379 aa19.25■□□□□ 0.67
HOXC9-201ENST00000303450 OR5AU1Q8NGC0 362 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms