RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 PQLC2Q6ZP29 291 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 FAM122AQ96E09 287 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 YPEL2Q96QA6 119 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 SEPSECSQ9HD40 501 aaKnown RBP12.25□□□□□ -0.45
COL6A2-201ENST00000300527 FZR1Q9UM11 496 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 CGAP01215 116 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 CD99P14209 185 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 UBE2ZQ9H832 354 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-201ENST00000300527 TMPRSS2O15393 492 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 CCL25O15444 150 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 KLF7O75840 302 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-201ENST00000300527 CRYBB3P26998 211 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 YPEL3P61236 119 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-201ENST00000300527 Q56UQ5 140 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 RTL8AQ9BWD3 113 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 SSBP3Q9BWW4 388 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-201ENST00000300527 PARD6GQ9BYG4 376 aaPredicted RBP12.24□□□□□ -0.45
COL6A2-201ENST00000300527 TP73-AS1Q9UF72 201 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 HAND1O96004 215 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 GPX1P07203 203 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 MOB1BQ7L9L4 216 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 RNF2Q99496 336 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 UQCR10Q9UDW1 63 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 WDR83OSQ9Y284 106 aa12.24□□□□□ -0.45
COL6A2-201ENST00000300527 HYPMO75409 117 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 S100A7P31151 101 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 WDR86Q86TI4 376 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 MPC1Q9Y5U8 109 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CBY3A6NI87 242 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CXorf1O96002 111 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CELA3BP08861 270 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 OR10J4P0C629 311 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CYB561P49447 251 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 GNG4P50150 75 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 PHF7Q9BWX1 381 aaPredicted RBP12.23□□□□□ -0.45
COL6A2-201ENST00000300527 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 GCHFRP30047 84 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 COMPP49747 757 aaPredicted RBP12.23□□□□□ -0.45
COL6A2-201ENST00000300527 VAMP3Q15836 100 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CENPWQ5EE01 88 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 TREML4Q6UXN2 200 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 FAM216AQ8WUB2 273 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 MGST2Q99735 147 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
COL6A2-201ENST00000300527 TMEM30CPA0ZSE6 113 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 DNPH1O43598 174 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 OR7C2O60412 319 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 NDUFB8O95169 186 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 C3orf79P0CE67 100 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 PSG5Q15238 335 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 LEMD1Q68G75 181 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 DPRXA6NFQ7 191 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
COL6A2-201ENST00000300527 PLGLB1Q02325 96 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 MDP1Q86V88 176 aa12.22□□□□□ -0.45
COL6A2-201ENST00000300527 TRBV6-6A0A0A6YYG2 114 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 H0Y8G0 127 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 M0R1X1 148 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 LGALS4P56470 323 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 RELBQ01201 579 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 LINC00696Q6ZRV3 163 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 LINC00596Q86U02 117 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 OR2Y1Q8NGV0 311 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 HSD17B10Q99714 261 aaKnown RBP12.21□□□□□ -0.45
COL6A2-201ENST00000300527 CEACAM8P31997 349 aaPredicted RBP12.21□□□□□ -0.45
COL6A2-201ENST00000300527 GFRA1P56159 465 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 OR2M7Q8NG81 312 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 OR4C5Q8NGB2 326 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 EAF1Q96JC9 268 aaPredicted RBP12.21□□□□□ -0.45
COL6A2-201ENST00000300527 GGTLC1Q9BX51 225 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.45
COL6A2-201ENST00000300527 RAB29O14966 203 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 TDGF1P13385 188 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 ZNF83P51522 516 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 SELENOTP62341 195 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 PRR27Q6MZM9 219 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 SELENOKQ9Y6D0 94 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 COL6A3P12111 3177 aa12.21□□□□□ -0.46
COL6A2-201ENST00000300527 RP1L1Q8IWN7 2480 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-201ENST00000300527 A0A1W2PS18 150 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 HELTA6NFD8 242 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 EPHA8P29322 1005 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-201ENST00000300527 MAGEA5P43359 124 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 GPR12P47775 334 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 COTL1Q14019 142 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 TAAR6Q96RI8 345 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
COL6A2-201ENST00000300527 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms