RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 ZP4Q12836 540 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 PHF7Q9BWX1 381 aaPredicted RBP11.24□□□□□ -0.61
COL1A2-213ENST00000620463 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 RND2P52198 227 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 FGF12P61328 243 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 PAX2Q02962 417 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 CLEC5AQ9NY25 188 aa11.24□□□□□ -0.61
COL1A2-213ENST00000620463 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
COL1A2-213ENST00000620463 PGPA6NDG6 321 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 J3QR06 171 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 J3QT63 122 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 CD55P08174 381 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 TDGF1P13385 188 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 EGR4Q05215 589 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
COL1A2-213ENST00000620463 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
COL1A2-213ENST00000620463 CLEC1BQ9P126 229 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 SPTY2D1-AS1A0A0U1RR47 76 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 SLC25A40Q8TBP6 338 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
COL1A2-213ENST00000620463 WNT16Q9UBV4 365 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 COL4A5P29400 1685 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 SSTR5P35346 364 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 OCC1Q8TAD7 63 aa11.23□□□□□ -0.61
COL1A2-213ENST00000620463 HEATR5BQ9P2D3 2071 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 PPIAL4EA0A075B759 164 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 TNFSF14O43557 240 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 TSPAN2O60636 221 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 PPIAL4FP0DN26 164 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 GNB2P62879 340 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 C18orf12Q96KH6 178 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
COL1A2-213ENST00000620463 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
COL1A2-213ENST00000620463 PRNDQ9UKY0 176 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 SYNGR1O43759 233 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 KIR2DL1P43626 348 aaPredicted RBP11.22□□□□□ -0.61
COL1A2-213ENST00000620463 KIR2DL2P43627 348 aaPredicted RBP11.22□□□□□ -0.61
COL1A2-213ENST00000620463 OR2H1Q9GZK4 316 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 CGAP01215 116 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 CEACAM8P31997 349 aaPredicted RBP11.22□□□□□ -0.61
COL1A2-213ENST00000620463 CDKN1BP46527 198 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
COL1A2-213ENST00000620463 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 OR10J3Q5JRS4 329 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 FHL5Q5TD97 284 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 SSBP4Q9BWG4 385 aaPredicted RBP11.21□□□□□ -0.61
COL1A2-213ENST00000620463 PILRAQ9UKJ1 303 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 APOHP02749 345 aaPredicted RBP11.21□□□□□ -0.61
COL1A2-213ENST00000620463 TIMM23BQ5SRD1 257 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 ZNF831Q5JPB2 1677 aa11.21□□□□□ -0.61
COL1A2-213ENST00000620463 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 A0A0G2JLM5 398 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 MS4A18H0YCH9 400 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 FOXL1Q12952 345 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 AKAP6Q13023 2319 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 MS4A18Q3C1V0 323 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 NEUROG1Q92886 237 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.62
COL1A2-213ENST00000620463 C18orf15Q96N68 181 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 PPIHO43447 177 aaKnown RBP11.21□□□□□ -0.62
COL1A2-213ENST00000620463 ABHD12Q8N2K0 398 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.62
COL1A2-213ENST00000620463 FER1L6-AS2Q96M78 137 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.62
COL1A2-213ENST00000620463 CACNA1GO43497 2377 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 ARHGEF17Q96PE2 2063 aaPredicted RBP11.2□□□□□ -0.62
COL1A2-213ENST00000620463 A0A087X0K7 114 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 LINC01565O15544 149 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 FTH1P19P0C7X4 201 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 CDKN1AP38936 164 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 RPL8P62917 257 aaKnown RBP11.2□□□□□ -0.62
COL1A2-213ENST00000620463 ALKBH6Q3KRA9 238 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 C9orf40Q8IXQ3 194 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 STPG3Q8N7X2 389 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
COL1A2-213ENST00000620463 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 F5H697 171 aa11.2□□□□□ -0.62
COL1A2-213ENST00000620463 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms