RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NDUFS6O75380 124 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 IGHV3-48P01763 117 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 KLF3P57682 345 aaPredicted RBP5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 RPL23P62829 140 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 SUMO1P63165 101 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 CYP2G1PQ6ZSU1 146 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 TBX15Q96SF7 602 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 NPCDR1Q9BY65 106 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 SRD5A3Q9H8P0 318 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 SLC35D1Q9NTN3 355 aa5.79□□□□□ -1.48
SYNPO2-206ENST00000610556 SPAARA0A1B0GVQ0 90 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 NTN3O00634 580 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TCAPO15273 167 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 COX7A2P2O60397 106 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 IGLV3-1P01715 115 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CAMPP49913 170 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 UBE2G1P62253 170 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TNFAIP6P98066 277 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ASCL4Q6XD76 172 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 VN1R17PQ8TDU5 208 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CCL17Q92583 94 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 BCL2L2Q92843 193 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ZNF503-AS2A6NEH8 195 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 NKX6-3A6NJ46 265 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TMEM210A6NLX4 147 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 FAM90A26D6RGX4 464 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ZNF253O75346 499 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ADH4P08319 380 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 OPRK1P41145 380 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 RPL30P62888 115 aaKnown RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 P2RY6Q15077 328 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TRIP6Q15654 476 aaKnown RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TEPPQ6URK8 271 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 OR1L6Q8NGR2 347 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 OR5B3Q8NH48 314 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 SSC4DQ8WTU2 575 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 BLNKQ8WV28 456 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 SPSB4Q96A44 273 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 WDYHV1Q96HA8 205 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 OR2V2Q96R30 315 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CBLN4Q9NTU7 201 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 OR6C3Q9NZP0 311 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CACNA1BQ00975 2339 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 PRRC2CQ9Y520 2896 aaKnown RBP5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 BDP1A6H8Y1 2624 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 RAB29O14966 203 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 HSBP1O75506 76 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CBLN1P23435 193 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 CCL8P80075 99 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 PAX5Q02548 391 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 GABRA6Q16445 453 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 VWA1Q6PCB0 445 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ZNF600Q6ZNG1 722 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 IMMP2LQ96T52 175 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 TMEM140Q9NV12 185 aa5.78□□□□□ -1.48
SYNPO2-206ENST00000610556 ARHGAP21Q5T5U3 1957 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 TMEM250H0YL14 139 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 J3QR06 171 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 SLC17A3O00476 420 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 CXorf1O96002 111 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HPRT1P00492 218 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 PAX9P55771 341 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 UBE2L3P68036 154 aaKnown RBP5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 FXYD3Q14802 87 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 PCSK4Q6UW60 755 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 BHLHA15Q7RTS1 189 aaPredicted RBP5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 TMEM183AQ8IXX5 376 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HIST3H2BBQ8N257 126 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 CCL13Q99616 98 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 NPVFQ9HCQ7 196 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 SLC45A2Q9UMX9 530 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 ZNF835Q9Y2P0 537 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HELTA6NFD8 242 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 IL18BPO95998 194 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 PLAUP00749 431 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 C1QTNF9P0C862 333 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HIST1H1BP16401 226 aaKnown RBP5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 ORM2P19652 201 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 RAB4AP20338 218 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 IGHV1-2P23083 117 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 CCKARP32238 428 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 SPCS3P61009 180 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 NRN1LQ496H8 165 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 ZNF497Q6ZNH5 498 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 TCF23Q7RTU1 214 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 OR8I2Q8N0Y5 310 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 SLC24A4Q8NFF2 622 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 ITLN1Q8WWA0 313 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 HSPB9Q9BQS6 159 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 ATG101Q9BSB4 218 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 TCF19Q9Y242 345 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 PLCE1Q9P212 2302 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 IGHV3-21A0A0B4J1V1 117 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 RAB7AP51149 207 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 RPEL1Q2QD12 228 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 FAM90A2PQ658T7 463 aa5.77□□□□□ -1.49
SYNPO2-206ENST00000610556 NHLRC2Q8NBF2 726 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms