RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 H0YJW9 148 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 M0R1W7 72 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 DFFBO76075 338 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 SPCS3P61009 180 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 ZNF429Q86V71 674 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 TGIF2LXQ8IUE1 241 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 TMEM217Q8N7C4 229 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 CCL19Q99731 98 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 NABP2Q9BQ15 211 aa23.7■■□□□ 1.38
CTDNEP1-208ENST00000573600 DOPEY1Q5JWR5 2465 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 CEBPZOSA8MTT3 80 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 IGLV1-47P01700 117 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 SEC11BP0C7V7 166 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 TMEM267Q0VDI3 215 aaPredicted RBP23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 HLA-DRB5Q30154 266 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 PDLIM3Q53GG5 364 aaPredicted RBP23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 SPANXN5Q5MJ07 72 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 OR4A47Q6IF82 309 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 STPG2Q8N412 459 aa23.69■■□□□ 1.38
CTDNEP1-208ENST00000573600 IFNA17P01571 189 aa23.68■■□□□ 1.38
CTDNEP1-208ENST00000573600 OR2B8PP59922 312 aa23.68■■□□□ 1.38
CTDNEP1-208ENST00000573600 PDPNQ86YL7 162 aa23.68■■□□□ 1.38
CTDNEP1-208ENST00000573600 ATP5SQ99766 215 aa23.68■■□□□ 1.38
CTDNEP1-208ENST00000573600 FBXO24O75426 580 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 FAM157CP0CG43 387 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 HBG1P69891 147 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 HBG2P69892 147 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 TMEM177Q53S58 311 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 TMEM14EPQ6UXP3 125 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 AMMECR1Q9Y4X0 333 aaPredicted RBP23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 LRBAP50851 2863 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 C15orf61A6NNL5 157 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 H7C2Y5 167 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 IGHV2-5P01817 119 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 IGKV1-16P04430 117 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 MC5RP33032 325 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 REG1BP48304 166 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 PDLIM4P50479 330 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 ZNF525Q8N782 197 aa23.67■■□□□ 1.38
CTDNEP1-208ENST00000573600 SHOXO15266 292 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 IGHV4-39P01824 125 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 METTL15P1P0C7V9 234 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 SPP1P10451 314 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 SULT1A2P50226 295 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 LHX4Q969G2 390 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 CLCC1Q96S66 551 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 NUP50Q9UKX7 468 aa23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 FOXA2Q9Y261 457 aaPredicted RBP23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 STRAPQ9Y3F4 350 aaKnown RBP23.66■■□□□ 1.38
CTDNEP1-208ENST00000573600 TRAV3A0A0B4J244 114 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 IL6RP08887 468 aaPredicted RBP23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 RAB13P51153 203 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 DIAPH2-AS1Q14236 149 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 Q8N7P7 452 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 ZDHHC16Q969W1 377 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 FLYWCH2Q96CP2 140 aaKnown RBP23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 TSNAXQ99598 290 aaKnown RBP23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 WASHC3Q9Y3C0 194 aa23.65■■□□□ 1.38
CTDNEP1-208ENST00000573600 C1orf122Q6ZSJ8 110 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 KIR3DL3Q8N743 410 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 OR4C13Q8NGP0 309 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 MARVELD3Q96A59 401 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 SAT2Q96F10 170 aaPredicted RBP23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 FAM210AQ96ND0 272 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 BARX1Q9HBU1 254 aaPredicted RBP23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 BET1LQ9NYM9 111 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 PRNDQ9UKY0 176 aa23.64■■□□□ 1.38
CTDNEP1-208ENST00000573600 BUB1B-PAK6H3BSN5 160 aa23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 SCAF4O95104 1147 aaKnown RBP23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 ARF6P62330 175 aa23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 SRSF1Q07955 248 aaKnown RBP eCLIP23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 HSD17B11Q8NBQ5 300 aa23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 TMEM14BQ9NUH8 114 aa23.64■■□□□ 1.37
CTDNEP1-208ENST00000573600 ANKRD34BA5PLL1 514 aa23.63■■□□□ 1.37
CTDNEP1-208ENST00000573600 COX7A1P24310 79 aa23.63■■□□□ 1.37
CTDNEP1-208ENST00000573600 HARBI1Q96MB7 349 aa23.63■■□□□ 1.37
CTDNEP1-208ENST00000573600 BPESC1Q9GZL8 116 aa23.63■■□□□ 1.37
CTDNEP1-208ENST00000573600 UPK2O00526 184 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 ENSAO43768 121 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 IFNA5P01569 189 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 RPP30P78346 268 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 PNKDQ8N490 385 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR4C12Q96R67 309 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 HIPK2Q9H2X6 1198 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 SRRM4A7MD48 611 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 ZNF705EA8MWA4 302 aaPredicted RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 COX6B1P14854 86 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 PRTN3P24158 256 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 HSPE1P61604 102 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 HAPLN4Q86UW8 402 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 PUSL1Q8N0Z8 303 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR4P4Q8NGL7 312 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 GNPNAT1Q96EK6 184 aaPredicted RBP23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 TCF19Q9Y242 345 aa23.62■■□□□ 1.37
CTDNEP1-208ENST00000573600 A8MXK9 166 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 DLX1P56177 255 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 SPINK9Q5DT21 86 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 LILRB2Q8N423 598 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR11H6Q8NGC7 330 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 REG4Q9BYZ8 158 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms