RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 OR4P4Q8NGL7 312 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR2T27Q8NH04 317 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR56B4Q8NH76 319 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 MUC7Q8TAX7 377 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR51E1Q8TCB6 317 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 RPS4Y2Q8TD47 263 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 THEM6Q8WUY1 208 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 CAPSLQ8WWF8 208 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR5P3Q8WZ94 311 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 PGLYRP4Q96LB8 373 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SPACA5Q96QH8 159 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR8B4Q96RC9 309 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 B9D2Q9BPU9 175 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 MICU1Q9BPX6 476 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SPXQ9BT56 116 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 RTL8AQ9BWD3 113 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 TSSK6Q9BXA6 273 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 POLR2J2Q9GZM3 115 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 FAM107BQ9H098 131 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 POLR2J3Q9H1A7 115 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 C1orf21Q9H246 121 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 METTL8Q9H825 291 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF286AQ9HBT8 521 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SAR1AQ9NR31 198 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 RBFOX1Q9NWB1 397 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 RDH8Q9NYR8 311 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 COPS3Q9UNS2 423 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SLC22A13Q9Y226 551 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 PIGLQ9Y2B2 252 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 CAB39Q9Y376 341 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 HERC1Q15751 4861 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IGKV1-27A0A075B6S5 117 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IGHV3-43A0A0B4J1X8 118 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RBMY1BA6NDE4 496 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RBMY1EA6NEQ0 496 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 CCDC182A6NF36 153 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF736B4DX44 427 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 SEC14L6B5MCN3 397 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF878C9JN71 531 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 M0R1W7 72 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 PLXNB1O43157 2135 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 XRCC2O43543 280 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 LANCL1O43813 399 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GMDSO60547 372 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RPP14O95059 124 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GADD45GO95257 159 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 SNAPINO95295 136 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 HAND1O96004 215 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IGHV3-11P01762 117 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RBMY1DP0C7P1 496 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IGHV1-8P0DP01 117 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IGHV3-43DP0DP04 118 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 COX4I1P13073 169 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 MUC1P15941 1255 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 SPNP16150 400 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 PRKACAP17612 351 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 CALB2P22676 271 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 NFYBP25208 207 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 CRABP1P29762 137 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 IFNA8P32881 189 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GLP1RP43220 463 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 MAGEA2P43356 314 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 NPBWR2P48146 333 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR12D2P58182 307 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 BPIFB3P59826 476 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 PSME3P61289 254 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RPL23AP62750 156 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GRK1Q15835 563 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 SLC36A3Q495N2 470 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 LINC01590Q5TEZ4 76 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GLYATQ6IB77 296 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RAB12Q6IQ22 244 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 ERICH5Q6P6B1 374 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 SSX6Q7RTT6 188 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 CALHM1Q8IU99 346 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RDH10Q8IZV5 341 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 CNPY4Q8N129 248 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 Q8N2B8 174 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 DRAM1Q8N682 238 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 EIF1ADQ8N9N8 165 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR4X2Q8NGF9 303 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR8J3Q8NGG0 315 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR52L1Q8NGH7 329 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR10AC1Q8NH08 325 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GNPDA2Q8TDQ7 276 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 AQP3Q92482 292 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 EMG1Q92979 244 aaKnown RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 C7orf34Q96L11 122 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 ATP6V1G3Q96LB4 118 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 GPX7Q96SL4 187 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 TEAD3Q99594 435 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 APOL4Q9BPW4 351 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 NIPSNAP1Q9BPW8 284 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 HSPB9Q9BQS6 159 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 PBOV1Q9GZY1 135 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 WFDC10AQ9H1F0 79 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 TLNRD1Q9H1K6 362 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 OR51I2Q9H344 312 aa1.74□□□□□ -2.13
SCFD1-219ENST00000556413 RANBP3Q9H6Z4 567 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-219ENST00000556413 ISYNA1Q9NPH2 558 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms